Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2625 ATGGGTGTCTTCACTTTCGAATATGAGACCACTTCTGCTATTGCCCCAGCTAAGCTATTCCAGGCACTTGTTCTTGACGCAGATAACCTTATCCCCAAGGTTGTACCTCAGGCCATTCAGAGCACTGAAATCATTCAAGGAGATGGTGGTGCTGGAACCATCAAGAAGATCACCTTTGGCCCAGGAAGCCCATACAAGAATGTGACGCACAAGGTTGAGGCAGTGGACAAGGAAAACTTCATATACAGCTACAGCGTGATAGAGGGGGATGCATTATCAGACAAGTATGAGAAAATAACGTACGAGACAAAGCTGGAGGCGTCTGAGATTGGAGGAAGTGTAATAAAAGGTTCGAGCAAGTACGTCACCAAAGGAGATAATGAGATCAATGAAGAGGACGTGAAGGCTAACAAAGACAAGGCTTCCTGGCTTCTGAGGGCTGTGGAAACCTACCTCTTGGCAAATCCTCATAGTGTTGAAATTGTTGACGGTAATGGAGGCCCTGGAACTATCAAGAAGCTCACTTTCGTCGCAGGTGGACAAACCCACTATGTGTTGCACAAAGTGGAAGCAATTGATGAAGCAAACTATGGATACAACTACAGCATAGTTGGAGGAAGTGGATTGCCAGACACAGTGGAGAAGATCTCATTTGAGACCAAATTAGTGGAAGGCCCTAATGGAGGATCTGTGGGGAAGGTCACAATCAAGTACTTCACCAAAAACGATGCTCCTCCCAGCGATGAAGAGATCTCAAGTGGAAAAGCCAAGGGAGATGGTCTTTTCAGGGCCATTGAGGCTTTCCTTTTGGCTAATCCTGATTACAACTAA 831 0.4597 MGVFTFEYETTSAIAPAKLFQALVLDADNLIPKVVPQAIQSTEIIQGDGGAGTIKKITFGPGSPYKNVTHKVEAVDKENFIYSYSVIEGDALSDKYEKITYETKLEASEIGGSVIKGSSKYVTKGDNEINEEDVKANKDKASWLLRAVETYLLANPHSVEIVDGNGGPGTIKKLTFVAGGQTHYVLHKVEAIDEANYGYNYSIVGGSGLPDTVEKISFETKLVEGPNGGSVGKVTIKYFTKNDAPPSDEEISSGKAKGDGLFRAIEAFLLANPDYN 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2625 276 FunFam Major pollen allergen Bet v 1-A 158 276 - -
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 Pfam Pathogenesis-related protein Bet v 1 family 157 272 IPR000916 GO:0006952
Dere03g2625 276 Pfam Pathogenesis-related protein Bet v 1 family 1 155 IPR000916 GO:0006952
Dere03g2625 276 SUPERFAMILY Bet v1-like 2 157 - -
Dere03g2625 276 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 206 238 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dere03g2625 276 FunFam Major pollen allergen Bet v 1-A 1 157 - -
Dere03g2625 276 Gene3D - 2 157 IPR023393 -
Dere03g2625 276 Gene3D - 158 276 IPR023393 -
Dere03g2625 276 PANTHER - 157 274 - -
Dere03g2625 276 CDD Bet_v1-like 157 269 - -
Dere03g2625 276 SUPERFAMILY Bet v1-like 157 276 - -
Dere03g2625 276 CDD Bet_v1-like 4 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2625 Dere-ChrDere03 41139363 41145041 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2625 03 41139363 41145041 Dere03g2625 03 41139363 41145041 ECH