Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2604 ATGAAGATCAACGTAAACTCCGTGGCTCGCAAAGTCGAGGTTGACAATCGCATACCCCTCCGTTATTACTATCGGATCGCCGATAACCTCCTCAAACAGGCTAGTATCTATCGAGGGGAGAACAATATAGTTGATTTGTATATCATACTTCTCAGATTTTCAAGTTTGGTTTCTGAAACTATACCATTTCATCAAGATTACCAAGATTTACTTCCTAAAGAAAGAGCAGCATATAGAAAGAGATTGCTAGCTGTATTAGATGAGCTTGAATCTTTGAAGCCAGAGTTCAAACGGGTTAATGAATTGAATGACTTACATGGGAATTCCCAATTTCCTGAAGCTAATGACTCTAATAAGGCTTTACACAGTTCAGTGACTTCATCTTTGGAATGGCCCGTTGTCAATAATAGTTCTTACTCGAGCATGGATTTTATGCAGCTGCAGCCTGCTGGATTGGGTCCACAGTCTTCATGGAAATATAATAATAAAAATAATGCTTATCATTTATCTTCAAATTCCTTGCCTATTGACAAGCAGTTTCAGAAACTATCTCTTAGTCTACCTCTTCCAAAGAAGGAGACTCTATCCAGACACTCATTTTTGGGACCCAATGGTCTTCAGGGCCAGTGGCTTGGACCATCTGCAGGAATGAAGGTTCAATATCCAAGCAATAATGATTTGACTCTTGCTGAGGATTCAAGCCTGAATCAGGCTGGACAATATGATCTTGTGGCAGTTAAAGAGGGTGATCAAGGGACAGTCATGACCACAATGGATTCAGTGCTCTCCTTGGATGATGGAAGTTGGCCACATTTTTCTGATGAGTCCTGTTCTCCAGTAGTGAATGAGTCAGTAGAGAGGCCCTTCCAGTTGCTTAACATTAAGCAACCTTCTCCTCCTCCAGTTCTTGCTCAGGTGCAACCAGAATATGCTCCAATTCCTCCCTCAAGAGTTGCAGATCCAAGACCAGGCCCAGCTAAATCTTCTCTGGATTCTGCACCTGGTCCTGCTACATATCAACACTTGCATATTCCTGTCAAAATGATGGATGATTTTTTGAGATTGACTATGGAAAATACACAGAAGAACTTAGAGACATGTGGTGTTCTTGTAGGATCCCTGAAAAACAGGGTTTTCCATATCACTACGCTTATAATTCCGAAGCAGGAATCAACTTCAGACTCGTGTCAAACATTGAATGAGGAAGAGATATTTGAAGTTCAAGACAGTCTTTCACTTTTTACGCTAGGCTGGATTCATACACACCCATCACAGACTTGTTTCATGTCATCAGTGGATCTCCATACACATTACTCATACCAGATCATGTTACCAGAGGCAATTGCTATTGTGATGGCCCCTACAGATGAGAGAAGTCCGCATGGTATATTTCATCTGTCTGACCCTGGCGGTGTGTCAGTAATTCGCAACTGTCAGCAACGTGGATTTCATCCCCATGAGGAGCCTTCTGATGGAAGCCCAATTTATGAGCACTGCTCTCATGTCTATATGAACCCTAACCTGAAATTTGATGTTATTGACCTTCGAGAGAGATGA 1557 0.4181 MKINVNSVARKVEVDNRIPLRYYYRIADNLLKQASIYRGENNIVDLYIILLRFSSLVSETIPFHQDYQDLLPKERAAYRKRLLAVLDELESLKPEFKRVNELNDLHGNSQFPEANDSNKALHSSVTSSLEWPVVNNSSYSSMDFMQLQPAGLGPQSSWKYNNKNNAYHLSSNSLPIDKQFQKLSLSLPLPKKETLSRHSFLGPNGLQGQWLGPSAGMKVQYPSNNDLTLAEDSSLNQAGQYDLVAVKEGDQGTVMTTMDSVLSLDDGSWPHFSDESCSPVVNESVERPFQLLNIKQPSPPPVLAQVQPEYAPIPPSRVADPRPGPAKSSLDSAPGPATYQHLHIPVKMMDDFLRLTMENTQKNLETCGVLVGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFTLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDERSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPSDGSPIYEHCSHVYMNPNLKFDVIDLRER 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2604 518 Gene3D Cytidine Deaminase, domain 2 327 518 - -
Dere03g2604 518 PANTHER AMSH-LIKE PROTEASE 3 516 - -
Dere03g2604 518 SMART pad1_6 337 469 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dere03g2604 518 Pfam USP8 dimerisation domain 7 95 IPR015063 -
Dere03g2604 518 CDD MPN_AMSH_like 339 516 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Dere03g2604 518 MobiDBLite consensus disorder prediction 312 336 - -
Dere03g2604 518 ProSiteProfiles MPN domain profile. 342 472 IPR037518 -
Dere03g2604 518 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 338 445 IPR000555 GO:0005515|GO:0008233|GO:0008237
Dere03g2604 518 Gene3D - 3 124 - -
Dere03g2604 518 SUPERFAMILY JAB1/MPN domain 341 472 - -
Dere03g2604 518 FunFam AMSH-like ubiquitin thioesterase 3 327 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2604 Dere-ChrDere03 40551384 40558496 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2604 03 40551384 40558496 Dere03g2604 03 40551384 40558496 ECH