Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2538 ATGGTTATCTTTAGTCCCGTAACTCCGGGTCAGGTTTCGTGCCTGCTTGGAATTATTCCAGTCGTGGTGGCATGGATATATGCGGAGATATTGGAGTATCGGAAAAATTCATTCACTTCCAAAGTTAGGAATTCGGATGTCAATTTGGTTGAAATGGGGAGTGATGCTATTAAAGAAGATGATACAGCCGTTTTATTAGAAGGGGGAGCCCTACAGACAGCCTCTGCAAAAGCTCGAAGTTTAACTGCCTCATCTCCAATTTTTCGATTCCTTATGATGGATGAAAATTTTCTGATTGAGAACCGTCTGACACTTCGAGCAATGTCTGAATTTGGTCTCCTTTTGGCTTACTTTTATTGGTGTGACCGCACTGATTTCTTTAGCTCATCCAAAAAGAGTTACAACAGGGATCTTTTCTGGTTTCTCTACTTCCTTCTCATCATAGTTTCAGCAATCACTTCTTTTAAGATACATCATGACAAGTCGCCGTTCTCTGGAAAATCCATACTTTATTTGAATAGGCACCAGACCGAAGAATGGAAAGGCTGGATGCAGGTTTTGTTCTTGATGTACCATTACTTTGCCGCATCTGAGATCTATAATGCTATTCGTATATTCATTGCTGCATATGTCTGGATGACTGGCTTTGGGAACTTCTCATATTATTATGTTCGTAAAGATTTTAGTCTAGCTAGGTTTGCACAGATGATGTGGCGGCTTAATTTCTTGGTGTTGTTCTGCTGTGTCATCCTGAACAACAGTTACATGTTATACTACATTTGTCCTATGCATACCCTTTTCACTCTTATGGTTTATGGGGCACTTGGTATTCTGAACAAGTACAATGAGATTGGATCAGTTATTGCAGCAAAAATCATTGCTTGCTTCTTGGTTGTCATACTAATATGGGAGATACCAGGAAATTTTGAATGGTTCTGGAGCCCGTTTTCTTTTATGCTCGGTTATACTGATCCTGATCCTGCAAAATCACACTTTTCTCGCTTGCACGAATGGCATTTCCGCTCAGGGCTTGATCGCTACATATGGATAATTGGAATGATTTATGCTTATTATCATCCAACTGTTGAAAGATGGATGGAGAAATTGGAGGAATTGGAAATCAAGCGCAGAATATCAATCAAAGCTGTTATTGTGCTAATATCTTTACTGGTGGGTTATTTATGGCTCGAGTATATATACAAGCTGGACAAGATTACTTACAACAAATACCATCCATATACCTCATGGATTCCTATAACTGTTTATATATGCTTGCGAAATGTTACTCAAAGTTTCCGCAGCTACACTTTGACCCTTTTTGCATGGCTTGGAAAGATCACATTGGAAACCTACATCTCCCAGATCCATATCTGGTTAAGGTCTGGAGTTCCAGATGGTCAACCCAAACTGTTGCTTTCTTTGATCCCTGACTACCCAATGTTGAATTTTATGCTCACTACTTCCATATATATAGCAATTTCTTATAGGCTCTTTGAACTGACAAATACACTGAAAATGGCATTTGTGCCAAGTAAAGACACCAAGCGTCTTGCACACAACATCATTACAGGAACAACAATCTCAGTTGTTTTATATTCGTTGTCCTTTTTCTTCCTAAGGGTGCCTCAGATGTGGGTTTGA 1641 0.3943 MVIFSPVTPGQVSCLLGIIPVVVAWIYAEILEYRKNSFTSKVRNSDVNLVEMGSDAIKEDDTAVLLEGGALQTASAKARSLTASSPIFRFLMMDENFLIENRLTLRAMSEFGLLLAYFYWCDRTDFFSSSKKSYNRDLFWFLYFLLIIVSAITSFKIHHDKSPFSGKSILYLNRHQTEEWKGWMQVLFLMYHYFAASEIYNAIRIFIAAYVWMTGFGNFSYYYVRKDFSLARFAQMMWRLNFLVLFCCVILNNSYMLYYICPMHTLFTLMVYGALGILNKYNEIGSVIAAKIIACFLVVILIWEIPGNFEWFWSPFSFMLGYTDPDPAKSHFSRLHEWHFRSGLDRYIWIIGMIYAYYHPTVERWMEKLEELEIKRRISIKAVIVLISLLVGYLWLEYIYKLDKITYNKYHPYTSWIPITVYICLRNVTQSFRSYTLTLFAWLGKITLETYISQIHIWLRSGVPDGQPKLLLSLIPDYPMLNFMLTTSIYIAISYRLFELTNTLKMAFVPSKDTKRLAHNIITGTTISVVLYSLSFFFLRVPQMWV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2538 546 Pfam 10 TM Acyl Transferase domain found in Cas1p 103 518 IPR012419 -
Dere03g2538 546 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 12 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2538 Dere-ChrDere03 39693210 39698601 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2538 03 39693210 39698601 Dere03g2538 03 39693210 39698601 ECH