Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1882 ATGGGGGTAACCAAAAGTGGGGTTATCTTTGTTCTTGCTCTGGTAATGCTGAACCAGCTGGTTGTTAATGGGGATGAGAACACCAAAACTCTGGTGAAGGTTGTGAAGGGGAAGAAGCTCTGCGACAAAGGGTGGGAATGTAAAGGATGGTCCAAATTTTGTTGTAATCTGACTATCACTGATTACTTCCAGACCTACCAGTTTGAGAATCTCTTCGCCAAGCGTAATTCGCCGGTGGCTCACGCAGTGGGTTTCTGGGACTATCATTCTTTCATCACTGCTGCCGCTCTTTATGAGCCATTGGGTTTCGGCACCACCGGCAACAAGACCATGCAGATGAAGGAGATTGCAGCTTTCCTGGGTCATGTTGGCAGTAAAACCTCTTGTGGTTATGGAGTGGCCACTGGAGGACCTTTTGCCTGGGGTCTCTGTTACAATCACGAAATGAGTCCTAGTCAGTCATACTGTGATGACTATTACAAGTTCACCTACCCCTGTGCTCCTGGGGCCCAATACTATGGACGTGGTGCCCTGCCTATTTACTGGAACTACAATTATGGTGCTGCTGGGGATGCTTTGAAGGTAGATCTACTGAGCCATCCAGAATACATAGAGCAGAATGCAACCATAGCCTTCCAGGCTGCAATTTGGAGATGGATGACCCCAATGAAGAAGTCACAACCTTCAGCCCATGACGCCTTTGTTGGCAACTGGAAGCCGACCAAGAACGACACAATGGAGAAACGCATTCCTGGTTTTGGCGTTACAATGAACATTCTATATGGTGATCTTACATGTGGGAAAGGTGAGGTTGACTCCATGAACAACATCGTCTCCCATTACCTGTATTATCTTGACCTGCTCGGTGTCAGTCGAGAGGAGGGAGGGTCCCATGAATTGCTTTCATGTGCTGAGCAGGTTCCCTTCAACCCATCTGCTCCTAGCTCCTCTGCATCGTCTTGA 963 0.4829 MGVTKSGVIFVLALVMLNQLVVNGDENTKTLVKVVKGKKLCDKGWECKGWSKFCCNLTITDYFQTYQFENLFAKRNSPVAHAVGFWDYHSFITAAALYEPLGFGTTGNKTMQMKEIAAFLGHVGSKTSCGYGVATGGPFAWGLCYNHEMSPSQSYCDDYYKFTYPCAPGAQYYGRGALPIYWNYNYGAAGDALKVDLLSHPEYIEQNATIAFQAAIWRWMTPMKKSQPSAHDAFVGNWKPTKNDTMEKRIPGFGVTMNILYGDLTCGKGEVDSMNNIVSHYLYYLDLLGVSREEGGSHELLSCAEQVPFNPSAPSSSASS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1882 320 Gene3D Endochitinase, domain 2 147 206 - -
Dere03g1882 320 Pfam Chitinase class I 67 294 IPR000726 GO:0004568|GO:0006032|GO:0016998
Dere03g1882 320 SUPERFAMILY Lysozyme-like 59 310 IPR023346 -
Dere03g1882 320 CDD chitinase_GH19 67 291 - -
Dere03g1882 320 FunFam Endochitinase (Chitinase) 147 206 - -
Dere03g1882 320 PIRSF Endochitinase 2 310 IPR016283 GO:0004568|GO:0005975
Dere03g1882 320 PANTHER CHITINASE-RELATED 11 306 - -
Dere03g1882 320 Gene3D - 67 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1882 Dere-ChrDere03 30649444 30652582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1882 1 312 Glycoside Hydrolase AT1G05850 71.975 2.38e-179 496
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1882 03 30649444 30652582 Dere03g1882 03 30649444 30652582 ECH