Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1785 ATGGCGGTGGCGCGTGGTGTTTTATTGGGGATTTGTCTGGCTCCCCGCTGCTGCTGTTCTGCTTCTGCGTCACTTTTCTATTTTTCCACAATTCCACCAACCCCGCAGTCTCCCTCGGAAGTTGTTGACTTGTTTATGTATGCCAACCTCTCACAAATAATTAAAAAGAAAAACATACCACTCTATCGAGGCATCTCCATCGTCCAACTAGACCGTTCAACCCTTATTTATACATTCCGCACTTCCCCCATTCTCTTCGCTCTGAGCCCCTTGCTTCTTCCTCTTCTTCTTTTTCTTCTCTCCTCACACACTGAGGGATATCATTCCATTCCCTTCCATTTCCCGCATCTCAATTCTTCTCTCGGTGAAGCCATGGCTTTGCTTGTTGAGAAAACCACCAGTGGCCGCGAGTACAAGGTCAAGGACATGTCTCAGGCCGACTTCGGTCGCCTCGAGATCGAGCTCGCCGAGGTTGAAATGCCCGGTCTCATGGCCTGCCGTACTGAATTCGGCCCTTCCCAGCCCTTCAAGGGCGCCAAAATCACCGGTTCCCTCCACATGACCATTCAAACCGCCGTTCTCATTGAGACCCTCACTGCTCTCGGTGCCGAAGTACGTTGGTGCTCCTGCAATATCTTCTCCACTCAGGACCACGCCGCCGCCGCTATTGCCCGAGACAGCGCCGCCGTCTTCGCCTGGAAGGGTGAGACCCTTCAGGAGTACTGGTGGTGCACTGAGCGCGCCCTCGATTGGGGTCCTGGCGGTGGGCCAGATCTCATTGTCGATGATGGTGGTGATGCTACTCTTTTGATCCACGAGGGTGTTAAGGCCGAAGAGATCTACGAGAAGACCGGCCAGTTCCCAGATCCGGCGTCTACCGACAATGCTGAGTTTCAAATTGTTCTTACCATCATCAGGGATGGGTTGAAGACCGACCCCAAGAGGTACCACAAGATGAAGGAGAGACTTGTCGGTGTCTCAGAGGAGACCACCACTGGTGTCAAGAGGCTTTACCAGATGCAGGCTAATGGCACTTTGTTGTTCCCTGCTATCAACGTTAACGATTCTGTCACCAAGAGCAAGTTTGATAACTTGTACGGTTGCCGTCACTCTCTTCCCGACGGACTGATGAGAGCCACTGATGTCATGATTGCTGGGAAGGTTGCTGTCGTATGTGGGTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCCTTGAAGCAGGCTGGAGCTCGTGTGATTGTGACAGAGATTGATCCCATTTGTGCCCTTCAGGCTCTCATGGAAGGTCTCCAAGTTCTGACCCTGGAGGATGTTGTCTCTGAGGCTGACATCTTTGTTACCACCACTGGTAACAAGGACATTATTATGGTTTCTCATATGAGGAAAATGAAGAACAATGCCATTGTTTGCAACATTGGACACTTTGACAATGAAATTGACATGATTGGGCTTGAGACATACCCTGGTGTGAAGCGTATCACCATCAAACCTCAAACCGACAGATGGGTTTTCCCTGACACCAACTCAGGCATCATTGTTTTGGCTGAGGGTCGTTTGATGAACTTGGGTTGCGCCACTGGTCACCCTAGCTTTGTGATGTCCTGCTCCTTCACCAACCAGGTCATTGCTCAGCTTGAGTTATGGAAGGAGAAGGCAACTGGCAAGTATGAAAAGAAGGTTTACGTTTTGCCTAAGCACCTGGACGAGAAGGTTGCTGCTCTCCACCTTGGCAAGCTTGGAGCTAAGCTCACTAAGCTCTCCAAAGACCAGGCTGATTACATCAGCGTGCCCATTGAGGGTCCATACAAGCCTCCTCACTACAGGTACTGA 1830 0.5098 MAVARGVLLGICLAPRCCCSASASLFYFSTIPPTPQSPSEVVDLFMYANLSQIIKKKNIPLYRGISIVQLDRSTLIYTFRTSPILFALSPLLLPLLLFLLSSHTEGYHSIPFHFPHLNSSLGEAMALLVEKTTSGREYKVKDMSQADFGRLEIELAEVEMPGLMACRTEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGQFPDPASTDNAEFQIVLTIIRDGLKTDPKRYHKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALMEGLQVLTLEDVVSEADIFVTTTGNKDIIMVSHMRKMKNNAIVCNIGHFDNEIDMIGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKATGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISVPIEGPYKPPHYRY 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1785 609 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 364 527 IPR015878 -
Dere03g1785 609 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 1. 209 223 IPR020082 -
Dere03g1785 609 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 137 366 - -
Dere03g1785 609 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 481 609 - -
Dere03g1785 609 PANTHER ADENOSYLHOMOCYSTEINASE 130 609 IPR000043 -
Dere03g1785 609 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 364 527 IPR036291 -
Dere03g1785 609 Gene3D - 367 528 - -
Dere03g1785 609 NCBIfam adenosylhomocysteinase 138 601 IPR000043 -
Dere03g1785 609 SMART AdoHcyase_NAD_2 364 527 IPR015878 -
Dere03g1785 609 SMART AdoHcyase_2 137 608 IPR000043 -
Dere03g1785 609 Gene3D - 139 609 IPR042172 -
Dere03g1785 609 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 133 601 IPR000043 -
Dere03g1785 609 FunFam Adenosylhomocysteinase 366 527 - -
Dere03g1785 609 Pfam S-adenosyl-L-homocysteine hydrolase 137 608 IPR000043 -
Dere03g1785 609 CDD SAHH 147 597 IPR000043 -
Dere03g1785 609 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 386 403 IPR020082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1785 Dere-ChrDere03 28941704 28944879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1785 03 28941704 28944879 Dere03g1785 03 28941704 28944879 ECH