Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1757 ATGGTGAAGAAGCGTGTCCCCGACTGGCTCAACAGTTCTCTCTGGTCATCTGCTCCTTCCTCAGATGACCACCGTGATCTCCGCTACTCTGCCGCCACGCCCACCGCCACCTACGGCAATGACGAGCGAGAGCATTCCACGGTGGACCCACCCATACCCGCGCCTTCTCCTCCTTCACCACCTGCCAGAGATGATCCTCCAAAGCCCCAGAGAATCGAAAATTCGCGAACTAATCACGTTGCGAACGATCACAATGGCACTTCTTCCCTTCCTTCTACCGACGACATCTCTCGCCAGGCTCAATTGCTGGCGGAGTTATCAAGAAAGGTGATAGATATAAGGGAATTGCGGAAAATCGCGTGTCAAGGTATACCTGATGGTGCTGGTATACGTTCTACAGTATGGAAGCTTTTGCTTGGATATCTTCCACTGGATCGTGGGCTTTGGTCGTCTGAATTAGCAAAGAAGAGGTCTCAATATAAACATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAGGATGTACAGCTCTACAAGTGACACTTCTGATGCTAAATGTGGGAGTCGAGGCTTGCTCTCTAGATCTGAAATTACTCATGGGGAGCATCCTTTGAGTCTTGGGAAGACTAGCGTATGGAATCAGTTCTTCCAGGACACAGAGATAATAGATCAGATTGACCGAGATGTAAAGCGTACTCATCCAGATATGAATTTTTTCTCTGGCGATTCACAATTTGCAAAATCAAATCAGGAGGCTTTGAAGAGCATATTAATTATTTTTGCAAAGTTAAATCCAGGTGTAAGATATGTTCAAGGGATGAATGAGATATTGGCTCCTCTGTTCTATGTGTTCAAAAATGACCCTGATGAAGGAAATGCAACCTTTGTTGAAGCAGACACATTCTTTTGTTTTGTTGAGCTATTAAGTGGGTTCCGTGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATCCGTTCCACTATTGCACGATTGTCTCAGCTTTTGAAAGAACATGATGAAGAGCTGTGGCGTCATCTTGAGATCACAACTAAAGTCAATCCCCAATTCTATGCATTTAGGTGGATTACGCTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGTCTTCTCATTTGGGACACTCTGTTAAGTGATCCAGAAGGTCCACAGGAGACTCTATTACGGATATGCTGTGCAATGCTAATTATTGTTCGGAGACGCCTCCTAGCGGGCGATTTCACTTCCAATCTCAAGTTGCTGCAACATTATCCCTCGACGAACATTAGCCATTTGCTCTATGTTGCCAATAAGTTGCGTGTACAATCAGTGTGA 1350 0.4474 MVKKRVPDWLNSSLWSSAPSSDDHRDLRYSAATPTATYGNDEREHSTVDPPIPAPSPPSPPARDDPPKPQRIENSRTNHVANDHNGTSSLPSTDDISRQAQLLAELSRKVIDIRELRKIACQGIPDGAGIRSTVWKLLLGYLPLDRGLWSSELAKKRSQYKHFKEEILMNPSEITRRMYSSTSDTSDAKCGSRGLLSRSEITHGEHPLSLGKTSVWNQFFQDTEIIDQIDRDVKRTHPDMNFFSGDSQFAKSNQEALKSILIIFAKLNPGVRYVQGMNEILAPLFYVFKNDPDEGNATFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLKEHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLLIWDTLLSDPEGPQETLLRICCAMLIIVRRRLLAGDFTSNLKLLQHYPSTNISHLLYVANKLRVQSV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1757 449 MobiDBLite consensus disorder prediction 73 94 - -
Dere03g1757 449 FunFam TBC1 domain family member 97 151 - -
Dere03g1757 449 FunFam TBC1 domain family member 13 209 320 - -
Dere03g1757 449 Pfam Rab-GTPase-TBC domain 222 413 IPR000195 -
Dere03g1757 449 ProSiteProfiles TBC/rab GAP domain profile. 125 392 IPR000195 -
Dere03g1757 449 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 211 320 - -
Dere03g1757 449 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 94 427 - -
Dere03g1757 449 SMART tbc_4 120 418 IPR000195 -
Dere03g1757 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 104 351 IPR035969 -
Dere03g1757 449 Gene3D - 328 448 - -
Dere03g1757 449 MobiDBLite consensus disorder prediction 50 65 - -
Dere03g1757 449 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 329 446 IPR035969 -
Dere03g1757 449 Gene3D - 95 148 - -
Dere03g1757 449 MobiDBLite consensus disorder prediction 1 94 - -
Dere03g1757 449 FunFam TBC1 domain family member 13 327 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1757 Dere-ChrDere03 28609392 28614179 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1757 03 28609392 28614179 Dere03g1757 03 28609392 28614179 ECH