Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1085 ATGGGCGATGTGAGGAAAATTGTGGTGGTGGTGGAGGACGTGGAAGCAGCAAGAATTGCTCTTCAATGGGCTCTTCACAATATCATTCGCTTCGGTGACATCATCACTCTTCTCCACGTCTACTCTCCCGCAAGATCCAGAAGCAAGAACAAAGCTCGTCTTCTTCGCCTCAAGGGCTTCCAATTGGCCCTTTCCTTCCAACATATTTGCGATACCTTCCCCAGCACAAAGGTTGAGATTATTGTCACGGAAGGGGACCAAGAAGGGAGGAAAATCGCAGCCACGGTGCAAGAGATTCAAGCTTCGATGCTCGTCGTTGGGCTTCATGATCGCAGTTTTCTTTACAAGTTGGCAATGGCTCAAAATAATGTTTCCAGCAACTTCAACTGCAGAGTACTTGCCATCAAACAGCCTCCTGCGTCACCATTGAGGCCCATGCTTTCTGCAGCAGCAGTGCTAGACAGCTCAACCAACATGGACTTTTCTCAGATTGATCTTTCTGGATTACAAGTACCAGAAAGTACCCCTCCACCAAAAATTCCATACCGAATCTGCCCCAACCCATCTGCAATTATCTGGAGATCAAGGAGACAGGTGACAGTGGGTGGTAATCCCATGGACTGGAGTGTAAATAGCCAGTGTAGAAGTTACAAAGTAGATGACCATAAATCAATAATGGAGGTGGCACTCATTCCAAACATGGATCCTGTAAATATTGGCCTTGGTTCTTCAGAGAAGGCAAATCCTATAAATTCAGTAAAGCCAAGAAAGAAAACAATGACATCAGTTTATCTGAAGTTCTTTGAGACAGCTGCTGATGGGAAGAGCCGGAGATGCAAGTTTTGTGGACAGACCTATTCTATTGCAACTGCCACAGGCAATTTGGGAAGACATCTTGCCAATCGCCATCCGGGCTATGATAAGTCAGGGGATGCTGTCAGCAATTCAGTAACTCAGCCCACTGTTGTGGTCAAGAAGACTCAACCTCAAGGAAAAGCACACCAGGTCGATTATGACCATCTAAATTGGTTGCTCATTAGGTGGCTTGTTATAGCTTCTCTGCCCCCATCAACTCTGGAGGAGAAGTGGCTAGCAAATTCCTTCAAGTTTCTAAATTCTTCTATACAACTCTGGCCAAGTGAGAAGTATAGATCTGTGCTTGATGAAGTTTTCAGATGCATGAGGGAAGAAGTGAAAGCTTTTTTAGAACAGGTTTCTTCGAAGTTCTCCATCACAATTGATTTCTGGACTTCTTATGAACAGATCTTTTATATGAGCATCACTTGTCAGTGGATTGATGAAAACTGGTGCTTCCAAAAAGTGCTTCTTGATATATGTCGGATACCTTTCCCATGTGGGAGTACGGAGATATATCACTCCCTCATTAAAGTTCTTAAAATGTACAATATTGAAAATAGAGTTCTCTCTTGTACTCATGATAATAGTCAAAGTGCCATGCACGCCTGCCATACTCTGAAAGAGGACTTAGATGCTCAGAAGGTAGGGCCATTCTGTTATATTCCCTGTGCTGCTAGAACTTTGAGCTTGATTATAGATGATGGTTTGAGATCCACAAAGTCAGTAATTTCTAAGATCCGGGAATTCGTAATAGAATTGAATGCCTCATCAGAGATGGCTGAAGATTTTATTCAAATGTCTACAGCTTATCAAGAAGGTACTTGGAAATTTCCACTTGATATTTCAGCAAGGTGGAGTGGAAACTACCAGATGCTTGACATTGTTCGTAAGGCAGGTAAATCCATGGATGCAGTTATTCATAAATACGATGAAACTCTTGGTGGTAGGATGATGCTGAGCCCTACTGAAAAAAGTGTGGCTAGTATCGTGCACCAATATCTAGAGCCATTCCACAAGACCACAAATAACATATGCACAAGTAAGGTGCCAACAGTTGGCCTGGTCCTTTTCTTCATGGATCACATCTCAGAAACAATTGCTAACTGCAGAGAATCCCGTCATAGCCCAGACTGGCTAAAAAGTGCTGCAGAAGAAATGGCTAAAAAGGCCAGAAGTTACATTAATCAGGTTTGCAACATATTTACATATATGACAGCAATTCTAGATCCTCGTATCAAAGGAGAGCTAATCCCTGAGGGTTTAAACTCAGACAGTTTTCTAGAGGAAGCAAGAACCCATTTTACAAGAAATTATTCTACCACTCATTTCTCATCTATGAGTACTGGATACAGTGCACAAGAAATTGAAGATGGAGGTGTTTCCTTTGCAGAGGAAATAGCTCGCAAGAAACGACGTGCAAGCATGAGCACCAGCACTGATGAGCTCAGTCAGTATCTTTTAGAGGCTCCGGCTCCGATACCAACTGATGTTCTAGAGTGGTGGAAGGTTAATAGTACACGCTATCCTCGGCTATCTTTGATGGCTAGAGATTTCCTCGCTGTGCAGGCAACTTCAGTTGTTCCTGAAGAACTATTCTGTGCCAAGGGTGATGAGATCCACAAGCAACGATTCTGTATGTCACATGATAGCACACAAGCTATTCTTTGTGTCAAGTCATGGATTCAGGTCGGCATCAAGTTTAAGTTTAAGTCAACTGAAATTGATTACGAGAGGTTAATGGAACTGGCAGCTGTGGCTGCAACAGATCATAGCTATGTCAGTTCAGACAAGAAGCAAAAATGA 2661 0.4295 MGDVRKIVVVVEDVEAARIALQWALHNIIRFGDIITLLHVYSPARSRSKNKARLLRLKGFQLALSFQHICDTFPSTKVEIIVTEGDQEGRKIAATVQEIQASMLVVGLHDRSFLYKLAMAQNNVSSNFNCRVLAIKQPPASPLRPMLSAAAVLDSSTNMDFSQIDLSGLQVPESTPPPKIPYRICPNPSAIIWRSRRQVTVGGNPMDWSVNSQCRSYKVDDHKSIMEVALIPNMDPVNIGLGSSEKANPINSVKPRKKTMTSVYLKFFETAADGKSRRCKFCGQTYSIATATGNLGRHLANRHPGYDKSGDAVSNSVTQPTVVVKKTQPQGKAHQVDYDHLNWLLIRWLVIASLPPSTLEEKWLANSFKFLNSSIQLWPSEKYRSVLDEVFRCMREEVKAFLEQVSSKFSITIDFWTSYEQIFYMSITCQWIDENWCFQKVLLDICRIPFPCGSTEIYHSLIKVLKMYNIENRVLSCTHDNSQSAMHACHTLKEDLDAQKVGPFCYIPCAARTLSLIIDDGLRSTKSVISKIREFVIELNASSEMAEDFIQMSTAYQEGTWKFPLDISARWSGNYQMLDIVRKAGKSMDAVIHKYDETLGGRMMLSPTEKSVASIVHQYLEPFHKTTNNICTSKVPTVGLVLFFMDHISETIANCRESRHSPDWLKSAAEEMAKKARSYINQVCNIFTYMTAILDPRIKGELIPEGLNSDSFLEEARTHFTRNYSTTHFSSMSTGYSAQEIEDGGVSFAEEIARKKRRASMSTSTDELSQYLLEAPAPIPTDVLEWWKVNSTRYPRLSLMARDFLAVQATSVVPEELFCAKGDEIHKQRFCMSHDSTQAILCVKSWIQVGIKFKFKSTEIDYERLMELAAVAATDHSYVSSDKKQK 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1085 886 CDD USP_Like 20 114 - -
Dere03g1085 886 Pfam Domain of unknown function (DUF4413) 631 714 IPR025525 GO:0003677
Dere03g1085 886 Pfam BED zinc finger 265 304 IPR003656 GO:0003677
Dere03g1085 886 Pfam Universal stress protein family 5 136 IPR006016 -
Dere03g1085 886 SMART bed5 259 306 - -
Dere03g1085 886 Pfam hAT family C-terminal dimerisation region 767 847 IPR008906 GO:0046983
Dere03g1085 886 SUPERFAMILY Ribonuclease H-like 395 849 IPR012337 -
Dere03g1085 886 Gene3D HUPs 3 140 IPR014729 -
Dere03g1085 886 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 198 - -
Dere03g1085 886 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 138 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1085 03 17335589 17348131 Dere03g1085 03 17335589 17348131 ECH