Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1082 ATGTTACAGAGACCTCACAGAGCACTACACTCTTCTTCTCAGCCATTCAACCTTCCCTCTCAGACACCAAAACCATCACTATCTCCTTCACAGTTCCAGTCATCACTACCCTCTTCTCCTCCATCTCTTCCCATCCTCAAGCACCAATGCAGGTTATCACGTCGAGAGCTCACAGTTTGCAGCAACTCTTGCTTGCTGCTTCTTCTGGGTGCTCAGGCTCTGGTACTTCCTCGCTTTTTAAGAGCTGAAGAAAACCTCATTGACACTACAGAAAGTGATCAACCTGAAGAGAATTCAACCGTCGATGCTGGTGGATGCACAGAAAGAAAACAAACCAAGACAGTGTTCCTTGATGTTTCCGTTGATGGTGAACCTGCTGGTCGCATTACCGTAGGGCTGTATGGAGATGATGTTCCTACAGGAGTTAATAGGTTTAGTAAGATTGTTAGTGGAGCTGCAGGCATAAGCTACAGAAGAAAAGAGTTCATCAAAATCATGTCCAATTACATCCAACATGGAGGGCTTAGATCCTATGGGGTGGATGCAGAACTTGCAAAGGGGACAGGAAGCAGCAATGTGGGAACAGAGAGTCTTGTTGAAGAGTGGGAGAGAACCTATGAGAGATGCCCAGGGACTAAGAACTTGGCTGGGAGTGTAGGCATTATTGTGAGAGATCCATCAAAACCACCTCCAAAGTTGAAGCTTGTTGCAAGAAAAGGGAAGCTAGAGATTGATCAAGAGGAGGTTGGAGTTGAACCCAATGGGACTGAGTTTGTGATTTCCATAAAGGATTCACCAGAATTGGATGCTTCGGCTTTAGTGATTGGAAGAGTAGTAGGAGGAATGGACGTTGTGCAGAGGATTGGCCAAGTGAAAACTGTACAAGAGAATACCGGCTCTCCTTATTTTAGGGTTGCAAAGCTAATAGGAGACAAGAGGGCTGTTGTAGCAGAAAGAGGATTCAATCGCCCTTATTCAAAAGTTGTTGTTACAAACTGCAGTGTACTTTAA 1011 0.451 MLQRPHRALHSSSQPFNLPSQTPKPSLSPSQFQSSLPSSPPSLPILKHQCRLSRRELTVCSNSCLLLLLGAQALVLPRFLRAEENLIDTTESDQPEENSTVDAGGCTERKQTKTVFLDVSVDGEPAGRITVGLYGDDVPTGVNRFSKIVSGAAGISYRRKEFIKIMSNYIQHGGLRSYGVDAELAKGTGSSNVGTESLVEEWERTYERCPGTKNLAGSVGIIVRDPSKPPPKLKLVARKGKLEIDQEEVGVEPNGTEFVISIKDSPELDASALVIGRVVGGMDVVQRIGQVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVVVTNCSVL 336
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1082 336 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 118 296 IPR002130 GO:0000413|GO:0003755
Dere03g1082 336 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 7 336 IPR044185 -
Dere03g1082 336 Gene3D - 103 336 IPR029000 -
Dere03g1082 336 FunFam Peptidyl-prolyl cis-trans isomerase B 105 336 - -
Dere03g1082 336 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 116 335 IPR002130 GO:0000413|GO:0003755
Dere03g1082 336 MobiDBLite consensus disorder prediction 1 40 - -
Dere03g1082 336 SUPERFAMILY Cyclophilin-like 111 336 IPR029000 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere03g1082 Dere-ChrDere03 17271047 17273371 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1082 03 17271047 17273371 Dere03g1082 03 17271047 17273371 ECH