Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1040 ATGGACTTCTGGAACAAAGCTCGAAGCTTAGCTGAAGAAGCCGCGAAGCGCACTCAGGACCTCACGAAGGAGGCCGCAAAGCGATCCCAGGACCTCTCCTTCGGAACTTCGAGATTCTCGGACATTGTAGCCGAGACCAGCAAGCGCTCCAAGGAAATCGCCTCTGAAGCTTCCAGGCGAGCCGACCAGATTCGAATCGAAGCCCTCAAGCGAGCCGACCAGATCAAACACTTAGCCCAGGGGATTAATCCTCCCGGAGGTGGAGTTGCGCCGGCGCCTGCGGAATCTTATGTAGTCAGCGACACTCAAGAAAAGGAGCTGAAGAGATTTGGTATCACAGAAGAATTGAGAGAGTTTGTGGAAGGAATTACTCCGAGCACCTTTAGAGATTTCCCTCTCGAAGATGATACGCAACTGTCTGATGGTCCAACGGTTTCAAATGTTAGGCAGGATCTAACTGAGTGGCAGGAAAAACATGCCAGTCTTGTTCTTTCTACTGTCAAGGAGATTTCAAAATTAAGGTATGAGCTGTGTCCACGTGTTATGAAAGAGAGGAAGTTCTGGAGAATATATTTTATACTTATGAACAGCCATATTGCACCCTATGAGAAGCAGTACATGGAGGAAGGTGAGCTAAAATCATCTGAACAAGTAAAAGATAAGAAAGCAATTGAACCACCCCAAGTTGGGCTGACTTCCGGTCAAGGAGAGCAGGACGTTAAAAGGGAGAGCAGAACTTCATCAGCTGAGCAAGACTTGGATGCCTTTCTTCTGGGAGATACAGGAGACACTGATGATGACCCAGATGATGGAGATGGTGGCGTTGACGACGATTTACAGAAAATGGTGGATAGTTCGGTGAAACTAATAGAAGTGTATGCTAAGTTGAATATACGAGGTGCTTTCCTACTAAACTAG 918 0.4717 MDFWNKARSLAEEAAKRTQDLTKEAAKRSQDLSFGTSRFSDIVAETSKRSKEIASEASRRADQIRIEALKRADQIKHLAQGINPPGGGVAPAPAESYVVSDTQEKELKRFGITEELREFVEGITPSTFRDFPLEDDTQLSDGPTVSNVRQDLTEWQEKHASLVLSTVKEISKLRYELCPRVMKERKFWRIYFILMNSHIAPYEKQYMEEGELKSSEQVKDKKAIEPPQVGLTSGQGEQDVKRESRTSSAEQDLDAFLLGDTGDTDDDPDDGDGGVDDDLQKMVDSSVKLIEVYAKLNIRGAFLLN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1040 305 MobiDBLite consensus disorder prediction 213 279 - -
Dere03g1040 305 Pfam BSD domain 154 199 IPR005607 -
Dere03g1040 305 Gene3D BSD domain 115 207 IPR035925 -
Dere03g1040 305 SMART wurzfinal6 147 199 IPR005607 -
Dere03g1040 305 SUPERFAMILY BSD domain-like 111 203 IPR035925 -
Dere03g1040 305 ProSiteProfiles BSD domain profile. 147 199 IPR005607 -
Dere03g1040 305 PANTHER BSD DOMAIN-CONTAINING PROTEIN 4 270 - -
Dere03g1040 305 MobiDBLite consensus disorder prediction 259 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1040 Dere-ChrDere03 16400753 16404718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1040 2 268 EF-hand Containing Proteins AT1G69030 47.735 3.73e-79 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1040 03 16400753 16404718 Dere03g1040 03 16400753 16404718 ECH