Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1030 ATGCGACGACGGGCTGCCGAGTATCGGCGCCCGGTTCGACGGAGGTTTTTTTATTGGATATGGTTGCTTCTTGGCTTGTTCTGTATTGCAGGCTTTGTTTTGTTTGTTGTACAACACAATCACCATGAAGATCGGGTCGAGCATCCCGTGCTGGAGAAAAATGCAAGAGTTGAACATGCTGAGGAGAATTTAAATTTTACAGAAGAAATATTAAGTGTAACCTCATTTTCCCGGCAGTTAGCAGAACAAATGGCCTTGGCCAAGGCTTATGTGATAATTGCCAAAGAGCACAATAACCTTCACCTAGCCTGGGAGCTTAGCTCAAAGATCAGGAGTTGTCAGCTTTTGCTTTCAAAAGTTGCCATGGCAGGGTCGCCTGTCTCATTTGACGAAGCAGAGCCAATTATAAAAGGCCTGTCTTCTCTAATTTTTAAGGCACAAGATATCCATTATGATGTTGCCACCACAATAATGACAATGAAATCGCGTATTCAACTTCTTGAAGAGCGAGCACATACAGCAACAGTTCAAGGCAATTTTTTTAGTCAAGTAGTAGCTGAAGCACTTCCCAAGAGCCTTCATTGCCTACATGTCAAACTTATGACAGATTGGGTCAAGATGCCGTCGCTGCAAAAACTCACAGATGAGAAGAGAAATTCCCCACATCTAATTGACAACAATCTGTATCATTTCTGCGTATTTTCTGATAATGTGCTGGCTACTTCTGTAGTCGTGAACTCCACAGTCTCCAATGCTGACGATCCAAAACAATTGGTCTTTCACATTGTCACTAATGGAGTTAATTATGGAGCAATGCAAGCATGGTTCCTCATTAATGACTTTAAAGGGGCCACCATAGAAGTGCAGAATTTTGAGAATTTTCGTTGGTTTAATGCATCTTATTCTCCAGTTGTCAAGCAACTCCTCAATGCAGACTCACGAGCCTTCTATTTTGGGGTATATAAAGATTTAGATGTTGAAGCAAAACTGCACAACCCTAAGTATTTGTCTTTACTGAATCATCTTCGGTTTTACATCCCAGAGATTTATCCACAACTTGAGAAGGTTGTTTTCCTGGATGATGATGTTGTTGTCCAGAAGGATCTGACCCTTCTTTTCTCATTGGATCTGCATGGAAATGTCAATGGTGCAGTAGAAACTTGTCTTGAAGTATTTCATCGTTTCTATAAGTATCTCAACTTCTCAAATTCGATTATAAGCTCAAAGTATGATCCTCAAGCATGTGGATGGGCATTTGGTATGAACATTTTCGACTTGGTTGCATGGAGTAAAGCAAATGTGACCGCAAGATATCACTATTGGCAAGAGCAAAATGCTGATGGGACACTATGGAGTCTGGGTACTCTCCCACCTGGTCTTCTAAGTTTTTGTGGTCTGACAGAGATACTTGACAGGAGATGGCATATTTTAGGATTGGGGAATGACGTAAATGTTGACAATCGCCTAATTGAAAGTGCAGCAGTTATTCACTTTAACGGGAACATGAAGCCATGGCTGAAGTTGGCTGTCAGCAGGTACAAGCCACTGTGGGATCGGTACATAAATCACAGTCACCCTCATCTTCAAGATTGTGCCACAGGTTGA 1605 0.4174 MRRRAAEYRRPVRRRFFYWIWLLLGLFCIAGFVLFVVQHNHHEDRVEHPVLEKNARVEHAEENLNFTEEILSVTSFSRQLAEQMALAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSKVAMAGSPVSFDEAEPIIKGLSSLIFKAQDIHYDVATTIMTMKSRIQLLEERAHTATVQGNFFSQVVAEALPKSLHCLHVKLMTDWVKMPSLQKLTDEKRNSPHLIDNNLYHFCVFSDNVLATSVVVNSTVSNADDPKQLVFHIVTNGVNYGAMQAWFLINDFKGATIEVQNFENFRWFNASYSPVVKQLLNADSRAFYFGVYKDLDVEAKLHNPKYLSLLNHLRFYIPEIYPQLEKVVFLDDDVVVQKDLTLLFSLDLHGNVNGAVETCLEVFHRFYKYLNFSNSIISSKYDPQACGWAFGMNIFDLVAWSKANVTARYHYWQEQNADGTLWSLGTLPPGLLSFCGLTEILDRRWHILGLGNDVNVDNRLIESAAVIHFNGNMKPWLKLAVSRYKPLWDRYINHSHPHLQDCATG 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1030 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 65 532 IPR029993 GO:0047262
Dere03g1030 534 Pfam Glycosyl transferase family 8 235 508 IPR002495 GO:0016757
Dere03g1030 534 FunFam Hexosyltransferase 231 527 - -
Dere03g1030 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 531 IPR029044 -
Dere03g1030 534 CDD GT8_like_1 229 522 - -
Dere03g1030 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1030 Dere-ChrDere03 16251972 16256450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g1030 1 531 Glycosyltransferase AT2G20810 54.664 0.0 584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1030 03 16251972 16256450 Dere03g1030 03 16251972 16256450 ECH