Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0968 ATGTTTGGTTTAAAGAAATCTCCCCTAAAACTTGTTAAATCTAGTTCTGTTGATCCTGTGTATCCTGTTAAATCGGGATCAAATCCATTTGATTCTGATGATGATGAGGCAAAGGAAAACCAAAAATATAATTCCTCAAAGATGGTTTCTTCAGACCCTACCCTAGTTTCACCAGAAAATCCCTTTGATGACGATGACGAAGATAGGAAATCTTCTTCCACATCTTCTTATGCCCTTCAGTCAGCAAAACGAAACCAGTATAAGACTGATTTTCGTGACTCAGGAGGAATAGAAAATCAATCAGTGCAAGAATTGGAGAATTATGCTGTATACAAGTCTGAAGAGACCACAAAATCAGTCAAAAACTGTTTGAAGATAGCAGAGGACATAAGAGAGGATGCTACCAAGACTTTAGTCACCCTACACCAACAGGGTGAGCAAATTACCAGGTCTCACAATGTTGCTGTTGACATCGACCTAGATCTTAGTCGGGGAGAAAAGCTTTTAGGAAGTCTTGGTGGCATCTTCTCCAAAACTTGGAAACCAAAGAAGACACGCCCTATTACAGGCCCTGTTATTGATGGAGATGATCAGGTCAGAAGAAAGGGTAGCCACTTAGAGCAGAGAGAGAAGTTGGGATTGACTTCTGTACCCAGAGGGCAGTCAAACATCCGGACACCACCTCCTGAACCATCCAATGCACTTGAGAAAGTTGAGGTTGAAAAGGGGAAACAAGATGATGCACTGTCAGATTTAAGTGATCTCTTGGGAGAGCTGAAAAACATGGCTGTTGACATGGGATCTGAAATTGAGAGGCATAACGAAGCACTGGACCATCTGTACAACGACGTGGATGAGCTGAATTTCCGTGTGAAAGGTGCTAATCAACGAGGTCGTCGTTTACTGGGAAAATAG 915 0.4219 MFGLKKSPLKLVKSSSVDPVYPVKSGSNPFDSDDDEAKENQKYNSSKMVSSDPTLVSPENPFDDDDEDRKSSSTSSYALQSAKRNQYKTDFRDSGGIENQSVQELENYAVYKSEETTKSVKNCLKIAEDIREDATKTLVTLHQQGEQITRSHNVAVDIDLDLSRGEKLLGSLGGIFSKTWKPKKTRPITGPVIDGDDQVRRKGSHLEQREKLGLTSVPRGQSNIRTPPPEPSNALEKVEVEKGKQDDALSDLSDLLGELKNMAVDMGSEIERHNEALDHLYNDVDELNFRVKGANQRGRRLLGK 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0968 304 Coils Coil 270 290 - -
Dere03g0968 304 CDD SNARE_Qc 244 300 - -
Dere03g0968 304 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 27 304 - -
Dere03g0968 304 Gene3D - 96 173 - -
Dere03g0968 304 SMART tSNARE_6 105 172 IPR000727 -
Dere03g0968 304 SMART tSNARE_6 234 301 IPR000727 -
Dere03g0968 304 FunFam SNAP25 homologous protein SNAP33 96 173 - -
Dere03g0968 304 SUPERFAMILY SNARE fusion complex 242 302 - -
Dere03g0968 304 SUPERFAMILY SNARE fusion complex 100 170 - -
Dere03g0968 304 Gene3D - 236 303 - -
Dere03g0968 304 MobiDBLite consensus disorder prediction 43 57 - -
Dere03g0968 304 CDD SNARE_SNAP25N_23N_29N_SEC9N 107 171 IPR044766 GO:0005484|GO:0031201
Dere03g0968 304 FunFam SNAP25 homologous protein SNAP33 236 303 - -
Dere03g0968 304 MobiDBLite consensus disorder prediction 187 206 - -
Dere03g0968 304 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 239 301 IPR000727 -
Dere03g0968 304 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0968 Dere-ChrDere03 14835999 14838921 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0968 03 14835999 14838921 Dere03g0968 03 14835999 14838921 ECH