Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0897 ATGTATAAGGCATTGTTTTTTACCTGCATTTTCCTGGGCCTATTGCTGCTTTCACAAGCCAATGCAGAAGATGATCATAGCATTGGAATTTATGAACTGAGAAGAGGACAAGTCCGGATCAAGTTGACTAACTATGGTGCAACGATTATGTCTGTCGTTGTCCCTGATAAACATGGGCCTTTTGGTGTGTTTCTTTCTCCAGGAAATTTATCTGATATTGTCCTTGGCTACGATTCAGTTGACTCGTACAAGAATGATACAGTATATTTTGGTGCCCTTGTTGGACGCGTGGCTAATAGAATTGGAGGAGCTCATTTCACCTTGGATGGCAAATCCTACAATCTGTCTGCTAATGATGGAAATAACACACTCCATGGTGGCTCCAAAGGCTTTAGTGATGTTGTATGGACAGTAGCGTCCCACAAGATAGATAGTCATATTACATTTACTTATGTCACTTCTGATAATGAACAAGGCTTCCCAGGAAAACTTGAGGTCTTTGTGACTTACTCGTTCTTTCAAACTAACAAACTGGTTGTGAAGATGGAAGCCAAGCCCATTGACCATGCCACACCAGTGAATCTAGCTCAGCATACTTACTGGAACTTGAGGGGCCACGACAGTGGAGACATTCTCTCACACACCATCCAGCTTTTAGGCTCACAGATCACCCCAGTGAACGACGAGCTCATCCCCACCGGTGAGCTCAAGCCGGTGAAGGACACCCCATATGACTTCCTTGAACCCAAAGAAATTGGCAGTCAAATTCACAATCTTTCTGATGGCTATGACATAAACTATGCGCTGGACAAGATTAATGGTTCCAAGCACTTCAATAGAGTGGCTGTGGTGAAGGACTCTCTGTCTGGGAGGACGATGGAGCTATGGTCAAACCAACCTGGTGTGCAGTTCTACACAAGCAACATGTTGAAGAATGTTAAGGGTAAGGGTGGAGCCACTTACCACAAGTTTGCTGCTCTTTGCTTGGAGACACAGGGTTTTCCAGATTCTGTGAATCATCCAAACTTCCCGTCGCAGATTGTGTATCCTGGACAGAGATACAAGCACTTCGTGGTTTACAGATTCACTGCTCACTAG 1098 0.4454 MYKALFFTCIFLGLLLLSQANAEDDHSIGIYELRRGQVRIKLTNYGATIMSVVVPDKHGPFGVFLSPGNLSDIVLGYDSVDSYKNDTVYFGALVGRVANRIGGAHFTLDGKSYNLSANDGNNTLHGGSKGFSDVVWTVASHKIDSHITFTYVTSDNEQGFPGKLEVFVTYSFFQTNKLVVKMEAKPIDHATPVNLAQHTYWNLRGHDSGDILSHTIQLLGSQITPVNDELIPTGELKPVKDTPYDFLEPKEIGSQIHNLSDGYDINYALDKINGSKHFNRVAVVKDSLSGRTMELWSNQPGVQFYTSNMLKNVKGKGGATYHKFAALCLETQGFPDSVNHPNFPSQIVYPGQRYKHFVVYRFTAH 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0897 365 Pfam Aldose 1-epimerase 31 361 IPR008183 GO:0005975|GO:0016853
Dere03g0897 365 PANTHER ALDOSE-1-EPIMERASE 27 363 - -
Dere03g0897 365 PIRSF GALM 17 365 IPR015443 GO:0016853|GO:0019318
Dere03g0897 365 CDD galactose_mutarotase_like 31 362 IPR047215 GO:0016853
Dere03g0897 365 Gene3D - 18 364 IPR014718 GO:0030246
Dere03g0897 365 SUPERFAMILY Galactose mutarotase-like 22 362 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0897 Dere-ChrDere03 13782939 13784983 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0897 14 365 Miscellaneous Gene Families AT3G47800 59.659 2.37e-154 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0897 03 13782939 13784983 Dere03g0897 03 13782939 13784983 ECH