Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0890 ATGGATCACCAATGGCGTTCCAGACCTATTCAAGGTAATGTTTGCCCTATCTGCTCAATCTCACACTTCCCTTTCTGCCCTCCTCCTCTACCATATCATCAACCTTCTAGATTTCCATTCGAAGGTGATCACTCCTTTCAAAGACCAGGTATTCCTTTCAGTCCCTATCCTGGAGCCACGGAAACGCAAGCTTCCTATGTTGCGAACCAGAATTATGGGTTCGCTGATCCCAGTCCCTGGCATAGAAACCCTAATTGGGATAACGTTTTACCGGGGCAAGCGCCCTTGCAGTACCCTAGAGAACATTTTAGGCCACCATTGTATGAACATGGCACTTCTAACGGTTACGTTGGTGAGGCTGATAGAAATTTCAAGAGGTCGAGGGTGGATGATTCTGGTTCTGCCACTCTTGCAAATGATTTTGATAAAAACTCTGCTCGGAATTTGTCGGAGGACGAGCGAAGATTGAAGTTAATTCGTGATCATGGGGTTGCTCTTAGTAAACCGCCTGAGGAGCAGAGTTTTGGTGGACCTGCAAAACTTAATCAGAACGGGTTTAATTCAGATGTAAATCAAGGTGTTTTTCGGAGGGATGAGAAAGATGTGTTTCCACATTCTCAGAATGGTGGATTACTGCCATTCCAATATGGTCTACCCAGAACTTCGCAGCAGCATATGTCTCAGCGTCAGGCTAATGATACTGTAGTATCAAATAGACCCGGTTATTCTCATAGGGATAATTGGCAGGGGATTAACGCACCATATCCTGAGCAGACTGGTAATGGTGATCCTAACAAACTGCTACCACAATCTTATGGAACACAGCATTATGTTCAATTGAGACACGATTTTCATTCCTCAGCTCAGTCAAGTAATGTAATATTGCCTGCACACGAGTTTAACTTTCCACATCAGGAGGGAAAACAAACTCAAGTTGGGCGACAAGATATATCTGGAATGTCTCAACGTGGCACATCAAATTTGAATGAGAGAGGTTTCTACGGTCCCTATTCTTACCCTACTGGTAGTATCAGTTTTGCTGAAAATATGAATCCAATGGAGGCTTCAAGGATCTTTAATGGCCAGCCTCCTCTTCCTTCTTCCCCACCACCACCTCTTCCATTGGACCCACCTGTGAATCAATCCTCTGAGTTGAAAACCTACTTTTCTCCTCCTAAGGCACCTGCTTCTCTTTTCCCTGTTTCTGTCAGTTCCTCAGCTGTGGCTCCTTCACCATACCCGAAAATTCCTGAAGCTCACTCCTTGCCTCAACCCTACTTTCAGAACAAATCCCTTCCTCAATCTTCTACTGGGTTCCCCCAGGAGGGACCTTATAAGGAGTTCTTGGGAGATGCCCAACCCTTTTCACTAAAGCAATTATCTGCTGATAAACCTAAGTTTATCGATGCATCCCACTTATTTAGGCATCCTCATCGAATTAGTCGTCCTGATCATATTGTGATCATCCTTCGAGGTCTTCCTGGTAGTGGGAAGAGTTACTTAGCAAAGATGTTACGTGATCTTGAGGTTGAAAATGGTGGTGATGCTCCACGTATTCATTCTATGGATGATTATTTTATGACTGAAGTTGAAAAGGTTGACGATAATGATGCATCAAAATCTTCAAGTTCAGGCAGAGGCAAGAAGCCTGTAATGAAGAAAGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAAGCATTCAAGAAGAACGTTGAGGAGGGAGTTTTCACCTTTATAATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCGAAGAGATCGGGTTATGAAGTTTACCTTTTAGAAGCTACTTACAAGGACCCTGCGGGATGTGCGGCGAGAAATGTGCATGGATTTACACTAGAAGGCATAGAAAAGATGGCTGGGCAATGGGAAGAAGCTCCATCATTGTACCTGCAGCTTGATGTGAGGTCGTTATTTCATGGTGATGATTTGAAGGAAAGCAGAATTCTGGAGGTGGATATGGATATGGAAGATGATATTGGTGATGCTTTACCTGTGATGCAGAGAAAAGAGGATGAGAAGAAATTAGATTCTCCTGTCAGGGATGATGCTAGTGATGGTTCCTTACTGGAAGGGAAGAGATGGGATGCTGAAGGAGAACATCCAGAAGAAGTCAGGGAATTGGGCAAGAGCAAATGGTCAGAAGAGTTTGATGAAGATGAGAATGATCAAACTGAAGGTAGGAAGGGCAATATTAGTGCTCTTTCTGGTTTAATTAATGCATATGGCCAGGAAAGAAAATCTGTACATTGGGGTGATCAGGTTGGCAATAGGGGGTTTTCAATAGGTGCTGCAAAGAAGGCAAATGTTTTGTCTTTAGTGATTGGACCCGGTGCGGGATACAATCTGAAATCAAATCCATTAACTGAAGAGGAGAGTCCAACATCCTGTAAAACTACTGAGCCAAAGAAGCACAATGTATTCCAAGAAAGAATCCGTGCTGAGCGTGAATCCTTTAAAGCTGTCTTTGATAGGAGACGACAACGGATTGGTGGACTTGATGTGGACGAGGACTAA 2589 0.4376 MDHQWRSRPIQGNVCPICSISHFPFCPPPLPYHQPSRFPFEGDHSFQRPGIPFSPYPGATETQASYVANQNYGFADPSPWHRNPNWDNVLPGQAPLQYPREHFRPPLYEHGTSNGYVGEADRNFKRSRVDDSGSATLANDFDKNSARNLSEDERRLKLIRDHGVALSKPPEEQSFGGPAKLNQNGFNSDVNQGVFRRDEKDVFPHSQNGGLLPFQYGLPRTSQQHMSQRQANDTVVSNRPGYSHRDNWQGINAPYPEQTGNGDPNKLLPQSYGTQHYVQLRHDFHSSAQSSNVILPAHEFNFPHQEGKQTQVGRQDISGMSQRGTSNLNERGFYGPYSYPTGSISFAENMNPMEASRIFNGQPPLPSSPPPPLPLDPPVNQSSELKTYFSPPKAPASLFPVSVSSSAVAPSPYPKIPEAHSLPQPYFQNKSLPQSSTGFPQEGPYKEFLGDAQPFSLKQLSADKPKFIDASHLFRHPHRISRPDHIVIILRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVDDNDASKSSSSGRGKKPVMKKVMEYCYEPEMEEAYRSSMLKAFKKNVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYLLEATYKDPAGCAARNVHGFTLEGIEKMAGQWEEAPSLYLQLDVRSLFHGDDLKESRILEVDMDMEDDIGDALPVMQRKEDEKKLDSPVRDDASDGSLLEGKRWDAEGEHPEEVRELGKSKWSEEFDEDENDQTEGRKGNISALSGLINAYGQERKSVHWGDQVGNRGFSIGAAKKANVLSLVIGPGAGYNLKSNPLTEEESPTSCKTTEPKKHNVFQERIRAERESFKAVFDRRRQRIGGLDVDED 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0890 862 FunFam YLP motif-containing protein 1 isoform X3 486 651 - -
Dere03g0890 862 Gene3D - 486 652 IPR027417 -
Dere03g0890 862 MobiDBLite consensus disorder prediction 690 751 - -
Dere03g0890 862 MobiDBLite consensus disorder prediction 806 827 - -
Dere03g0890 862 MobiDBLite consensus disorder prediction 167 186 - -
Dere03g0890 862 MobiDBLite consensus disorder prediction 356 375 - -
Dere03g0890 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 658 IPR027417 -
Dere03g0890 862 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 267 850 IPR026314 GO:0005634
Dere03g0890 862 MobiDBLite consensus disorder prediction 690 754 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0890 03 13614406 13623829 Dere03g0890 03 13614406 13623829 ECH