Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0886 ATGACGACGCCGTTTCAGCCGCCGAGCACCGTCAGAAAGCTCGTCGTCGAAGTAGCGGACGCACGCGATCTTCTTCCCAAAGATGGCCAAGGTAGTTCGAGCCCTTATGTCATGGCAGAGTTCGACGGACAGAGGAAGAGAACCACGACCAGATTCAAAGAGTTGAACCCTGTTTGGAACGAAGCTATCGAGTTCATAGTATCCGACCCGGATAATATGGAGTACGAAGTGCTAGAGATTGAGGTCTTCAACGACAAGAAGTACGGAAATGGGATTGGGCGTAAGAATCAGTTTCTGGGCAGAGTGAAGTTTTATGGTACCCAGTTTGCGAAAAGAGGGGAGGACAGTTTGATCTACTTTGCGTTGGAGAGAAAGAGCATGTTTAACTGGATTAGGGGCGAAATTGGCCTCAAGATTTACTACTATGATGAGTTGATTCAGGATCAGAAGCCGCCGGAGCAGCAAGTCACAGAGCAAGAGAGGATGAAGAGGAAGACGAAGTCGCCTCCCATTGTAGTGGTTGAGGAAGAAAGGGATTTCGAGGTTCCTGGGCCATTTGAGGATTGTGAACCTGAAGTGCATTCTCAATCGCCTCCTGCTTTGGTTGTTGAAGAATCGCCGCCGCCGGTGGTCAATCTACCTCAGGATCAACCATTGCCGGAAATGGCAGGAGCGTCTGTGCCAGAAATACAATATACTCCAGAAGTGAAAATTTTGGAGGCAGTCAGAATGCGAGGAGGGGAGAGAGTGAGAAATTTGAAGAGGCCCAATGCAGATGTTTACTCTCATCAAGTTATGTCCGGCAGGACCGCCGGCGACATATCTGAGAGGGCTCGACGCTGTGATGTGGTGGAACCAACGCAGTACCTGTATGTCAGAATCGTTAAGGCTCGTGGGATTGCTCCAAATGAGAATCCCTATGTGAAGATTCGTACGCCCAGCCGCTTCGTCAGATCAAAACCTGCAAGTTACCTGCCCAATGACCCCAAGGACTCGCCGGAGTGGAACCAGGTGTTCAAGCTGGGACACAAGAAGACCGATTCTGCGAACGCGACTTTAGAGATTTCGGTTTGGGATTCTCCAACTGAGAAATTCTTAGGCGGCGTTTGCTTCGATCTTTCTGAAGTACCCGTACGAGACGCTCCTCACATTCCCTTGGCCTCAAAATGGTACAACCTAGAAGGCGGTGCCGCCGGTCAGAGTTCCGCCAAGGTTTCCGGCGACATTCAGCTTTCTGTCTGGATCGGTACACAGTCCAATGATGCATTCCCGGAGGCGAGGAGCTTCGACGCGTCGTATGTAGCTCACACTCGCCCCAAAGTTTACCAATCCCCGAAGCTATGGTATCTGCGTGTGAACGTATTAGAAGCTCGAGACCTCAACATCACACCCAATCTGCCTCCATTGCCGCCGCCGGATATTCGAGTAAAGGTTCAGTTGGGTTTTCAAATAGTACGAACAACACGAGCCTCCATGATAAACCACCATAGCATTTCATTCCACTGGAACGAAGACCTCCTATTCGTCGCCGGCGAGCCTCTGGAAGACTCCGTGATTTTACTCGTAGAACAACGTACCAGGAACGAAGTTGCACCGTTGGGGCACACCGTTATCCCCCTGAGCTCCATCGAGCGACGCATCGATGAGCGCCACGTGGCACCGAAATGGTTCGCCTTGGAGGCTGGGTCCTACTGCGGGCGTGTCCATCTGCGTCTGTGCTTGGAAGGTGGGTATCACGTGCTGGACGAAGCGGCGCACGTGTGCAGCGACTTCCGGCCGACGGCGAAGCAGCTTTGGAAGCCGGCGATCGGAATTCTAGAGCTTGGCATCCTCGGGGCCCACTCTCTTCTTCCCATGAAAACCAAAGGTACAGGAAAGGGGTCCACTGATGCTTATTGTGTGGCAAAGTACGGAAAGAAGTGGGTCCGTACTCGAACCATCACTGACAGCTTCGATCCACGCTGGAACGAGCAGTACACGTGGCAAGTATACGACCCCTGCACCGTATTAACCATCGGGGTGTTCGACAACTGGCGAATGTTTGCTGATGTGTCTGAAGAGAAGCTCGATGCTCGCATTGGCAAGGTACGAGTACGGGTCTCTACGCTGGAGAGCAACAAGATATATACGAATTCGTATCCTTTAATGGTATTATCAAGAACCGGGTTGAAGAAAATGGGTGAGATTGAGTTGGCGGTCCGGTTCGCCTGCCCGTCAATCTTACCCGATGCTTTTCGGGTGTTCGGGCAGCCATTGCTTCCTCGAATGCACTATCTCCGCCCAATTGGGGTGGCCCAACAGGAGGCGCTACGTGGGGCCGCCACGAAGATGGTGGCCCAATGGTTGTCCCGGTCGGATCCACCGTTGGGTCACGAGGTGGTCGGTTTCATGCTGGACTCGGACTCCCACACTTGGAGCATGAGAAAAAGCAAGGCTAATTGGTTTCGGATCGTGGCGGTTCTGGCATGGGCTTTCGGGTTGGCGAAATGGATAGACAATATAAAGAGGTGGAGAAATCCCACTACAACTATTTTCTTCCATCTGGTCTACATTGTGCTTGTTTGGTACCCGGATTTGATTATCCCTATCGGGTTCTTATACGTGGTTCTGATTGGAATATGGTATTACCGGTTCAAACCCAAGACACCCGGTGGGATGGATACCCGAATGTCACAAGCCGAAACGGTTGACCCGGATGAACTAGACGAAGAATTTGACACAATCCCAAGTTCGAAACCACCCGATATAATTCGGATCCGGTATGATAGGTTACGTATGGTCTCGGGTCGGGTCCAGAAAGTGTTGGGTGATATAGCCACACAAGGAGAGAGAATACAAGCCTTGGTGAGCTGGAGGGACCCAAGGGCCACGAAATTGTTCATAGGGGTGTGTTTGGTAATTACAGTGATAATGTTTATGGTGCCGCCGAAACTGGTGGCTGTGGCTCTAGGATTCTACTACCTTCGTCATCCCATGTTTAGGGACCCAATGCCGCCGGCGAGTTTGAATTTTTTCCGGCGACTTCCAAGCTTGTCAGATCGGTTAATGTAG 3051 0.5149 MTTPFQPPSTVRKLVVEVADARDLLPKDGQGSSSPYVMAEFDGQRKRTTTRFKELNPVWNEAIEFIVSDPDNMEYEVLEIEVFNDKKYGNGIGRKNQFLGRVKFYGTQFAKRGEDSLIYFALERKSMFNWIRGEIGLKIYYYDELIQDQKPPEQQVTEQERMKRKTKSPPIVVVEEERDFEVPGPFEDCEPEVHSQSPPALVVEESPPPVVNLPQDQPLPEMAGASVPEIQYTPEVKILEAVRMRGGERVRNLKRPNADVYSHQVMSGRTAGDISERARRCDVVEPTQYLYVRIVKARGIAPNENPYVKIRTPSRFVRSKPASYLPNDPKDSPEWNQVFKLGHKKTDSANATLEISVWDSPTEKFLGGVCFDLSEVPVRDAPHIPLASKWYNLEGGAAGQSSAKVSGDIQLSVWIGTQSNDAFPEARSFDASYVAHTRPKVYQSPKLWYLRVNVLEARDLNITPNLPPLPPPDIRVKVQLGFQIVRTTRASMINHHSISFHWNEDLLFVAGEPLEDSVILLVEQRTRNEVAPLGHTVIPLSSIERRIDERHVAPKWFALEAGSYCGRVHLRLCLEGGYHVLDEAAHVCSDFRPTAKQLWKPAIGILELGILGAHSLLPMKTKGTGKGSTDAYCVAKYGKKWVRTRTITDSFDPRWNEQYTWQVYDPCTVLTIGVFDNWRMFADVSEEKLDARIGKVRVRVSTLESNKIYTNSYPLMVLSRTGLKKMGEIELAVRFACPSILPDAFRVFGQPLLPRMHYLRPIGVAQQEALRGAATKMVAQWLSRSDPPLGHEVVGFMLDSDSHTWSMRKSKANWFRIVAVLAWAFGLAKWIDNIKRWRNPTTTIFFHLVYIVLVWYPDLIIPIGFLYVVLIGIWYYRFKPKTPGGMDTRMSQAETVDPDELDEEFDTIPSSKPPDIIRIRYDRLRMVSGRVQKVLGDIATQGERIQALVSWRDPRATKLFIGVCLVITVIMFMVPPKLVAVALGFYYLRHPMFRDPMPPASLNFFRRLPSLSDRLM 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0886 1016 Gene3D C2 domain 602 739 IPR035892 -
Dere03g0886 1016 Gene3D C2 domain 434 574 IPR035892 -
Dere03g0886 1016 ProSiteProfiles C2 domain profile. 270 391 IPR000008 -
Dere03g0886 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 289 428 IPR035892 -
Dere03g0886 1016 Pfam Plant phosphoribosyltransferase C-terminal 864 1016 IPR013583 -
Dere03g0886 1016 Gene3D C2 domain 9 170 IPR035892 -
Dere03g0886 1016 Gene3D C2 domain 284 432 IPR035892 -
Dere03g0886 1016 FunFam C2 domain-containing protein 587 739 - -
Dere03g0886 1016 CDD C2A_MCTP_PRT_plant 13 143 - -
Dere03g0886 1016 ProSiteProfiles C2 domain profile. 587 713 IPR000008 -
Dere03g0886 1016 CDD C2D_MCTP_PRT_plant 605 732 IPR047255 -
Dere03g0886 1016 ProSiteProfiles C2 domain profile. 1 119 IPR000008 -
Dere03g0886 1016 SMART C2_3c 605 712 IPR000008 -
Dere03g0886 1016 SMART C2_3c 289 385 IPR000008 -
Dere03g0886 1016 SMART C2_3c 449 552 IPR000008 -
Dere03g0886 1016 SMART C2_3c 13 118 IPR000008 -
Dere03g0886 1016 Pfam C2 domain 13 105 IPR000008 -
Dere03g0886 1016 Pfam C2 domain 289 392 IPR000008 -
Dere03g0886 1016 Pfam C2 domain 448 559 IPR000008 -
Dere03g0886 1016 Pfam C2 domain 604 715 IPR000008 -
Dere03g0886 1016 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 13 1016 IPR047259 -
Dere03g0886 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 448 595 IPR035892 -
Dere03g0886 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 604 756 IPR035892 -
Dere03g0886 1016 ProSiteProfiles C2 domain profile. 428 557 IPR000008 -
Dere03g0886 1016 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 11 143 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0886 Dere-ChrDere03 13555474 13558524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0886 2 1016 Lipid Metabolism Gene Families AT1G74720 64.635 0.0 1412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0886 03 13555474 13558524 Dere03g0886 03 13555474 13558524 ECH