Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0842 ATGCCTCCTCCTTCTACAACCTCATCCCAGAACCTGAAACAACGGGTTTTCACGTGCCTCACCAAGCTTTCCGACCGCGACACTCAGTCGCTCGGCGCTTCCGAGCTCGAGTCCATTGCTCGGAACCTCGATCCGAACTCTGTGTCGGTTTTCCTCTCATGTATACACTCAACCGATGCGTCGGACAAATCTCCGGTTCGTAAACAATGCGTGCACGTCTTGGAGGTGCTCTCTGAGACGCATGGAAATTCGCTGTCTCCCTATCTTTCGAGAATTCTTGGCAACATAGTTCGTCGTCTCCGCGACCCGGATTCGTCGGTTCGATCCGCTTGTGTGAATTCGGTTTCGGCATTGTCGACTCACGTCACTAAGCAACCGTTTTCCTCTTTTCTGAAACCGTTAGCGGAGGCGCTGTTCACTGAGCAGGACCAGAATTCGCAGACGGGCGCGGCGCTTTGTTTGGCTGCTGCCATTGATGCAGTTTCGGATCCGGAACCGGCGAGATTAACAAAGCTCTTGCCCAGGTTCGAGAAGTTACTTAAGTGCGAAGGATTTAAGGCAAAGCCGGCGCTGTTGACGCTGATCGGAAGCGTTATCGAGGCTGGTGCGTTATTCAGTCCTGGGGCTTTGAGAAACTTGATTCCTTGTATAGTGGAATTCTTGAGTAGCAAAGATTGGGCAGCCAGGATGGCTGCGGCCGAGGCACTGACCAAATTGGCAGTAGCGGAGAGGGACATGTTGTCAGAATTCAAGGCTGGATGTTTAAAAGTTTTCGAGAATCGACGATTCGATAAGGTGAAGGCTGTTCGGGAAGTTATGAATCAGATGCTGGAGACGTGGAAGCAGATACCTGATGTTTCCGATGAATTCTCTCCACCTCCTCAATCGCAAGCTTCTTCCAAAGAGAATGCAAGTGATGGGCGCTATCCGCCAGTCATGCAGAATTCTTGTACTCCTGGTTCTGTAATGTCGCAATTTCGGAAAAAATCCATGCCAGTTAGCAGATCGACCCCACCAGATAGTTCTACCGCTAGCAATAATAAGAAGATAGGCACTTTGAATAGTAACAAGAGAATGAGCTCAGGTGTGCTGCGAAAACTAAACCATAAGAATTGGGATGTTCAAATAACTGTACCAAATGCTCCCTCTGCGACCATGCTTTACCAGGGTGATCCTGAAGAGAGGCATGATTTTGTCCGGGAAAGGGGCAAAAAAGAGAAAACAAGATTTTCAAAGCCAGAAATGAAACGGGCTCTTTTTGGTAAAAGTCCTGATGACAAAATTTCCAAGTTTTGTGGGTCCAAAACTGGCTCTCGTGTGGTTCCTTGTCATGAAGAGAGCCAAGACTCAGTTGCTGTCACTAATGTCGCTAAAGATCAACGCAAGAATGACAAAGAGTGTGAAGATTTATCTTTGATCCGCAACCAGTTATCTGAAATTGAAAAGCAGCAATCAAGTTTGCTTGATCTTTTGCAGGGATTCATTGGAAGCTCACAAAATGGAATGCAATCTTTAGAGACTCGTGTGCATGGCCTTGAGTTGGCATTGGATGAGATCTCTTATGATTTGGCCGTATCAAGTGGAAGGATGACTAATGCTGATGCTCATGGGATGACTTGTTGCCTGCTGCCTGGTGCAGAATTTTTGAGCTCCAAGTTCTGGAGGAAAACTCAGGGCAGGTATTCATCCTTCGGGATCTCTAGATCTGCTGGCACTCCATCACTAGCTGCCATGAACTACAGAGCTGACAAGAATGGCAATATTGAGACGAACCACAGATTTAGATTCCGTGGTGATCGAGGGTTTATCACTAATCCACTGGCAGAGATTCATTCTAACTCCAGGGTGACATCAAATGTTGCACGCGCGTAG 1872 0.476 MPPPSTTSSQNLKQRVFTCLTKLSDRDTQSLGASELESIARNLDPNSVSVFLSCIHSTDASDKSPVRKQCVHVLEVLSETHGNSLSPYLSRILGNIVRRLRDPDSSVRSACVNSVSALSTHVTKQPFSSFLKPLAEALFTEQDQNSQTGAALCLAAAIDAVSDPEPARLTKLLPRFEKLLKCEGFKAKPALLTLIGSVIEAGALFSPGALRNLIPCIVEFLSSKDWAARMAAAEALTKLAVAERDMLSEFKAGCLKVFENRRFDKVKAVREVMNQMLETWKQIPDVSDEFSPPPQSQASSKENASDGRYPPVMQNSCTPGSVMSQFRKKSMPVSRSTPPDSSTASNNKKIGTLNSNKRMSSGVLRKLNHKNWDVQITVPNAPSATMLYQGDPEERHDFVRERGKKEKTRFSKPEMKRALFGKSPDDKISKFCGSKTGSRVVPCHEESQDSVAVTNVAKDQRKNDKECEDLSLIRNQLSEIEKQQSSLLDLLQGFIGSSQNGMQSLETRVHGLELALDEISYDLAVSSGRMTNADAHGMTCCLLPGAEFLSSKFWRKTQGRYSSFGISRSAGTPSLAAMNYRADKNGNIETNHRFRFRGDRGFITNPLAEIHSNSRVTSNVARA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0842 623 Gene3D - 5 380 IPR011989 -
Dere03g0842 623 MobiDBLite consensus disorder prediction 289 355 - -
Dere03g0842 623 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 6 577 IPR033337 GO:0005874|GO:0008017
Dere03g0842 623 SUPERFAMILY ARM repeat 10 280 IPR016024 -
Dere03g0842 623 MobiDBLite consensus disorder prediction 284 355 - -
Dere03g0842 623 FunFam TORTIFOLIA1-like protein 3 isoform A 4 361 - -
Dere03g0842 623 Pfam HEAT repeat 213 240 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0842 Dere-ChrDere03 13009259 13011771 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0842 03 13009259 13011771 Dere14g0522 14 5384700 5387084 CCT