Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0841 ATGGTTTCTGATTCAATCACCACCGCTCCTATTCCTTCAGCCGCGAACACTAAGAATTTGGGCAAGAAAAAGCGGACTAACAGGTCTGCTAAATTAAAGCAATGTAAGATAGATGCCCGTCGCGAGCAGTGGCTTTCTCAAGTTGCGATAAAGAATAAGGGATGCAAGGACGGAGGGGACGATGTGCACGCGCCACCGACGCCTGTTGGGAAAGACAGCAAACGTTCGTGGGAGAAATTGGACACGAGGCCTAGAGTTGAAGAGATTGACGGGTCGATTCATCAAAATGGCTACTTGGAATCTCCGTCCAATAGTCCCACCAGTGTTGATAGTAGCATCTTGGGCGGTAGTAATTCTGGAACAAATTTCACTGGGAGTAGCAGCAGCAGCAGTAGTAGTAGTGCTGGGTGCTGCTCTGGAAATGTCACAGAAGAAGAAGAAGGTGATGATGATTGCTTGGATGATTGGGAGGCTGTTGCTGATGCTTTAGCCGACGATGACAAGCATCAAAACCCTTGTTCGGAGTCGCCCCCTGCATATGAACCTCTTGCGCAAATGGTTTCACCTTCTGAAATGACTCATGGGTCGAATTTAGGAGTGCGGAATTCTAAAACCGAGGGTGATAGACTAGTTTCATGGGCCTCTGGCAATAGCCGAGCTTGGAGGCCTGATGATGCTTTTCGTCCTCAGAGTCTGCCCAATCTGTCTAAGCAGTACAGTTTACCAAATTCAGACAGGCGTTGTGGAGGAGAGGTCCCATGGGCACGCCCTGCTGCGCCATCCCCATGTCCAATATGCTGTGAGGATCTTGATTTAACAGACTCAAGTTTTTTACCCTGCTTGTGTGGATTCCGGCTTTGCCTCTTTTGTCACAAGAGGATTCTTGAGGAGGATGGCCGCTGTCCTGGGTGCAGGAAGCCTTATGAATGCAAATCTGTAGAGCCAGAGGCAAGCGTCCATGGAGGCAGCCTCACTCTCCGTTTGGCCCGCACGTGTAGCATGATTTATAGGTCTTAA 1017 0.4946 MVSDSITTAPIPSAANTKNLGKKKRTNRSAKLKQCKIDARREQWLSQVAIKNKGCKDGGDDVHAPPTPVGKDSKRSWEKLDTRPRVEEIDGSIHQNGYLESPSNSPTSVDSSILGGSNSGTNFTGSSSSSSSSSAGCCSGNVTEEEEGDDDCLDDWEAVADALADDDKHQNPCSESPPAYEPLAQMVSPSEMTHGSNLGVRNSKTEGDRLVSWASGNSRAWRPDDAFRPQSLPNLSKQYSLPNSDRRCGGEVPWARPAAPSPCPICCEDLDLTDSSFLPCLCGFRLCLFCHKRILEEDGRCPGCRKPYECKSVEPEASVHGGSLTLRLARTCSMIYRS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0841 338 MobiDBLite consensus disorder prediction 1 15 - -
Dere03g0841 338 MobiDBLite consensus disorder prediction 72 90 - -
Dere03g0841 338 MobiDBLite consensus disorder prediction 96 140 - -
Dere03g0841 338 Pfam RING/Ubox like zinc-binding domain 263 309 - -
Dere03g0841 338 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 257 320 IPR013083 -
Dere03g0841 338 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 259 334 IPR039780 GO:0004842|GO:0030014
Dere03g0841 338 FunFam RING/U-box superfamily protein 256 321 - -
Dere03g0841 338 ProSiteProfiles Zinc finger RING-type profile. 263 305 IPR001841 -
Dere03g0841 338 MobiDBLite consensus disorder prediction 1 34 - -
Dere03g0841 338 SUPERFAMILY RING/U-box 261 315 - -
Dere03g0841 338 MobiDBLite consensus disorder prediction 50 151 - -
Dere03g0841 338 CDD mRING-HC-C4C4_CNOT4 263 306 IPR039515 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0841 Dere-ChrDere03 12985103 12986363 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0841 03 12985103 12986363 Dere03g0841 03 12985103 12986363 ECH