Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0811 ATGGGGGAAAACAAACGAAAGAGAGGACGCAAACCCAAAAATCCCGCTGCAGAAACCCTAGACTTCCCTACCACTAGCACTGCCCCTAACAACAACAACCCTTCTACTATGGATGATGTCTTCTCTGTTGGCAGCGTTGAATTAATTGACACCACTGCCTCTCCACATCACCGTCGTCGACTGAAGAAGTCAACCAACCACTCTGACAAGCCCGATAAGCCACCTGTAATATCTAAAGCTAGACTGGTCAGCCGTCCTGTTGACCATGATCGCGATTTTACAGTTCCTGGCGACGTAGGGGGTTCCACAGCTGTGGTGGCAGCCATGGAAGCCGATCTAGAGTGGGACAGGGTTTCAGCAAGAGTGGTGCCAGCGATGGACTCTGTTGTTAAGGTGTTTTGTGTGCACACAGAACCTAATTTCTCACTGCCATGGCAGAGAAAAAGGCAGTACAGCTCCAGCAGTAGTGGGTTTGTGATTGGCGGGAGGAGGGTGCTCACCAATGCCCATTCAGTGGAGCACTACACCCAAGTCAAGCTCAAGAAACGTGGCTCTGATACCAAGTACTTGGCCACAGTGCTTGCCATTGGGACTGAGTGTGACATTGCCATGCTTACTGTTGAAGATGATGAATTCTGGCAAGGAATATCTCCTGTAGAGTTTGGGGACTTGCCCACACTACAAGATGCGGTTACTGTTGTGGGCTACCCAATTGGTGGAGACACTATTTCAGTGACTAGTGGTGTTGTATCTCGCATTGAGATTCTATCATACGTCCATGGTTCCACCGAGCTTCTAGGTTTACAGATTGATGCTGCTATAAACTCTGGTAATTCTGGTGGGCCTGCGTTTAATGATAAAGGAAATTGTGTGGGAATTGCATTTCAGTCCCTCAAGCATGAAGACGTGGAGAATATAGGTTATGTCATTCCGACTCCAGTTATCATGCACTTCATCCATGATTATGAAAAGCATGGAGCATATACAGGATTCCCTATCCTTGGGGTTGAATGGCAGAAAATGGAAAATCCTGATCTGCGAAGGGCAATGGGCATGAAATCTGATCAAAAGGGTGTACGTATTAGAAGAATTGATCCAACTGCTCCAGAATCTAATGTTTTGAAACCGTCAGATGTTATCCTTAGCTTTGATGGGGTTGATATTGCCAATGATGGGACAGTTCCATTTCGCCATGGAGAGCGCATTGGTTTCAGTTATCTTATATCCCAGAAATACACTGGGGATAATGCAGTAATCAAAGTCTTGCGGAATTCAGAGATTTTCAACTTTGACATTAAGCTTGGTAGTCACAAAAGGCTCATTCCAGCACATAGCAAGGGCAGGCCTCCCTCATATTATATCATTGCAGGATTTGTTTTTACGACTGTGTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAATATGAAGCTCCAGTTAAGCTTTTGGATAAATTGCTGCATTCAATGCCACAGTCACCAGATGAGCAACTTGTTGTGGTCTCTCAGGTGCTGGTTGCTGATATAAATATTGGTTATGAAGATATTGTTAACACTCAGGTCCTTGCTTTTAATGGTAAACCCGTAAAAAATCTGAAGAGCTTGGCCAGCATGGTAGAGAGCTGCAATGATGAATATCTAAAATTCGATCTAGAATATAATCAGATGGTGGTCCTTCGCACAACAACTGCTAAAGCAGCTACTCTAGATATTCTTGCTACACACTGCATTCCGTCAGCAATGTCAGATGATCTCAAGTCATGA 1770 0.4469 MGENKRKRGRKPKNPAAETLDFPTTSTAPNNNNPSTMDDVFSVGSVELIDTTASPHHRRRLKKSTNHSDKPDKPPVISKARLVSRPVDHDRDFTVPGDVGGSTAVVAAMEADLEWDRVSARVVPAMDSVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFVIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWQGISPVEFGDLPTLQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGNCVGIAFQSLKHEDVENIGYVIPTPVIMHFIHDYEKHGAYTGFPILGVEWQKMENPDLRRAMGMKSDQKGVRIRRIDPTAPESNVLKPSDVILSFDGVDIANDGTVPFRHGERIGFSYLISQKYTGDNAVIKVLRNSEIFNFDIKLGSHKRLIPAHSKGRPPSYYIIAGFVFTTVSVPYLRSEYGKDYEYEAPVKLLDKLLHSMPQSPDEQLVVVSQVLVADINIGYEDIVNTQVLAFNGKPVKNLKSLASMVESCNDEYLKFDLEYNQMVVLRTTTAKAATLDILATHCIPSAMSDDLKS 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0811 589 Gene3D - 440 589 IPR046449 -
Dere03g0811 589 Gene3D - 331 439 IPR036034 GO:0005515
Dere03g0811 589 CDD PDZ_serine_protease 332 432 - -
Dere03g0811 589 PANTHER - 53 587 - -
Dere03g0811 589 PRINTS HtrA/DegQ protease family signature 264 281 IPR001940 GO:0004252|GO:0006508
Dere03g0811 589 PRINTS HtrA/DegQ protease family signature 185 205 IPR001940 GO:0004252|GO:0006508
Dere03g0811 589 PRINTS HtrA/DegQ protease family signature 227 251 IPR001940 GO:0004252|GO:0006508
Dere03g0811 589 PRINTS HtrA/DegQ protease family signature 373 385 IPR001940 GO:0004252|GO:0006508
Dere03g0811 589 PRINTS HtrA/DegQ protease family signature 157 169 IPR001940 GO:0004252|GO:0006508
Dere03g0811 589 FunFam Protease Do-like 9 105 212 - -
Dere03g0811 589 Gene3D - 213 324 IPR043504 -
Dere03g0811 589 FunFam protease Do-like 9 214 324 - -
Dere03g0811 589 SUPERFAMILY PDZ domain-like 357 439 IPR036034 GO:0005515
Dere03g0811 589 MobiDBLite consensus disorder prediction 19 40 - -
Dere03g0811 589 Pfam PDZ domain 441 586 IPR041517 -
Dere03g0811 589 MobiDBLite consensus disorder prediction 1 77 - -
Dere03g0811 589 SUPERFAMILY Trypsin-like serine proteases 125 326 IPR009003 -
Dere03g0811 589 Pfam PDZ domain 334 434 IPR001478 GO:0005515
Dere03g0811 589 Gene3D - 106 212 IPR043504 -
Dere03g0811 589 Pfam Trypsin-like peptidase domain 156 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0811 Dere-ChrDere03 12654878 12664872 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0811 03 12654878 12664872 Dere03g0811 03 12654878 12664872 ECH