Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0787 ATGGCTACCCAGTCGGCGGCTCCTCCCAATGCTTCCGATGATAAACAACAAAACCCAGGTTTTGGCCCTGAAATTGTAAAATCAACAAATGTGGATCAGCAAAATACCCGAGAAGAGCCTGTTAAACAGAGTTCAACATCAGTATTTGTGAACTCACAACTAATGCGAGAAGAACAAGTACAGAATGCTATTAAATTTCTATCACACCCCAAAGTTAGAGGCTCCCCTGTCTTGCACAGGAGATCATTTCTGGAGAGTAAGGGCCTCACAAAGGAGGAGATAGATGAAGCCTTTCGCCGTGTGCCGGATTCACCTCCAAGTGTGCTGACAGCTGGTGAAAATCAAGATGGGCAGCTGAAGACATATTCGAGCATTCAGCAACAAGCCCAGGCACAGGGTGCATCTGCTTCTATTGGTACCACTACTTCATACTCCAGGTTTCACTGGTCCCATGCCTTAATAGCAATGGGATTACTGGCTGCTTCAGGTGCTGGAACAGCTTTACTAATAAAGAATTCAATTCTTCCTCGATTAAAATCTTGGATACGCAAGGTTGTTTTAGAAGATGATGACCCATTGAAGAAAATAGACTCAAAACCATCATTGGCAGAAGAAACTGCTCTAGCAGCAAAAGCTGCTGCTGCTGCTGCTGCAGATGTGGCAAAAGTAAGCCAGGAAATGCTGATTTCACAAAGTGAAGAGAGAAGACACTTCGGGAAACTTGTGAGCCTTGTGGATAAGCAAGTACAAGAAATGAAGTTGATGACTAATGCAATAAGAATATTGGAAGCTGCTACTGGAGCCACTCTTTCAGAGCTAGAAGATCGGCGAGCAACTCAAGCAAGTTCAAAGCAACTGATTGCAAATGGCAAGGTGGACTATGACTTGCGTTCAGGGAGATATTCTTCAACACCTGCTTCATCTGAACCATCTACAGCGCCTCATCCAAAATCATATATGGAGATAATGGCCATGGTCCAGAGAGGGGAGAAGCCTTCAAACATTAGAGATATCAATGATCTTCCCCCCAATCCAAATCAGCAACCATCAAATCCTCGCTTAGCACCTAGAACCAAGCCTTGGGAGGTTGGTCAGGTGCAAAACACCTATGCGCAGGTGCTTCAGTCTCGGGTAAATGATGAAGACTTGTTTTCCAAGGTTCAAGACACCTCCATTCAAGTGAATGGAGATGCTTCAGCACCCTGGGGGCAAAGGAAAAATGTCAGAATCAGTGAGATCAATAATGAGAATGAGCATGATGCATTACGTTACAGTGCTGAGTCCAGTCAGCAGCAGCCAATCAAACGTTCATGGGTTCCTCCTCAGCCACCTCCTGTAGTAATGCCAGAGGCTGCAGAAGCCATTAGACGGCCAAAGTCGGTGGTCCAGAAGGAACAAGTTCCTGGTGATGAGTCAGCAGCCCAACCTTCAGACGTGTCTGATGAGGTGCAAAGGATCCCAAAAGTATCGGAATCTGAAGGTGCAATAGACGGCGGCAGTCTCAGCTCAATGCCCAGCTCTGGTGAGATACAAGCAGCTCAGGAAGTCTAA 1551 0.4603 MATQSAAPPNASDDKQQNPGFGPEIVKSTNVDQQNTREEPVKQSSTSVFVNSQLMREEQVQNAIKFLSHPKVRGSPVLHRRSFLESKGLTKEEIDEAFRRVPDSPPSVLTAGENQDGQLKTYSSIQQQAQAQGASASIGTTTSYSRFHWSHALIAMGLLAASGAGTALLIKNSILPRLKSWIRKVVLEDDDPLKKIDSKPSLAEETALAAKAAAAAAADVAKVSQEMLISQSEERRHFGKLVSLVDKQVQEMKLMTNAIRILEAATGATLSELEDRRATQASSKQLIANGKVDYDLRSGRYSSTPASSEPSTAPHPKSYMEIMAMVQRGEKPSNIRDINDLPPNPNQQPSNPRLAPRTKPWEVGQVQNTYAQVLQSRVNDEDLFSKVQDTSIQVNGDASAPWGQRKNVRISEINNENEHDALRYSAESSQQQPIKRSWVPPQPPPVVMPEAAEAIRRPKSVVQKEQVPGDESAAQPSDVSDEVQRIPKVSESEGAIDGGSLSSMPSSGEIQAAQEV 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0787 516 Pfam Pex14 N-terminal domain 56 100 IPR006785 -
Dere03g0787 516 MobiDBLite consensus disorder prediction 333 358 - -
Dere03g0787 516 MobiDBLite consensus disorder prediction 496 516 - -
Dere03g0787 516 MobiDBLite consensus disorder prediction 424 516 - -
Dere03g0787 516 MobiDBLite consensus disorder prediction 1 48 - -
Dere03g0787 516 Pfam Family of unknown function (DUF5572) 314 363 - -
Dere03g0787 516 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 1 498 IPR025655 GO:0005515|GO:0005778|GO:0016560
Dere03g0787 516 FunFam Peroxisomal membrane protein PEX14 48 110 - -
Dere03g0787 516 Gene3D - 48 109 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0787 Dere-ChrDere03 12400826 12406844 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0787 03 12400826 12406844 Dere03g0787 03 12400826 12406844 ECH