Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0746 ATGTCATGGCCAGCGAGAGACCACGGGATCGTACGCCGTATGGCAAGCCTTCCACGAAACATTTTGGGGGGATTCTCAAGGGCCATGAGTGACATAGTCTTTGCAGGATCAGGAAGAAGAAGAAATCCACATCCACTTTCAGATTTCCCGTTCCAACCATTTCAGCCGTTGGAACCCCCCGGGGGAGCAGAGGAGTGGGCTTTTCTAGAGAGTTTCGAGCAGCAATACGGTGCCGTTCATCCCTTCTTCTACGCGTGCCGTTTCAAGGACGTTCTGAAATTAGCAGAGCAAGACAAGAAGTTGGTCTTCGTGTACCTTCATTCTCCAGAACACCCTTTCACGCATATGTTCTGTAAGGAAACGCTGTGCTCTGAGCTGGTGACCGAGTTTCTTGACGTCAATTTTGTCTGTTGGGGAGCTCTTGCTGATCGAGGAGAGGGTCCTCATATGGTCGCCGCTCTACGCCCCGTTAGCTTTCCGTTTTGCGCCGTCATAGCCTCCGTTCCCGGTGATACCATGGCGGTGCTGCAACAGATAGAAGGGCCACTTTCGCCAGCAGAACTAGTGGAGGTTCTACAGAGAACAGTGGAAGAGCAAGGATTGGCTTTTGGAGTTGGAAGTAGTGCCAAAGCTAAGCAGGAAGAGAAGATCAGAGCTGATCGTCGGCTTAGGGAGGAACAAGATGCAGCTTATCTTGCAGCTTTGCAAGCAGACAGGGAAAAGGAAGAACTCAGGAATTTACCGTCGAGAGAAAGAGTTCAGAAGCCAGTAGAAGCATTGAATACGAGAAATTATGAGAAGCCTAAGAACATTGCTGTCAGTAAACACAACACTAAAGGGAATGAATTTGCAACCACTCCAGAACATCAAAACAAGGGAGTTCCAAATAGAGGAGGCCAGTCTCAGGCCACTCAGATATTAATAAGGTTTCCAAATGGGGAAAGAAGAGAGCATAGTTTCCAGTGTACGGACAAACTCCAGTCTGTTTTCTCGTTCATCGATTCATTGGGTTTGCCTGGCATTGCAAACTACAGATTGGTCTCAAACTTCCCAAGAAGAGTGTTTGGCGTTGATCAAATGAGAATGACTCTCAAAGATGCTGGCTTGCACCCGAAAGCCAGTCTCTTCCTCGAGCCCATGCCCATGTGA 1149 0.4865 MSWPARDHGIVRRMASLPRNILGGFSRAMSDIVFAGSGRRRNPHPLSDFPFQPFQPLEPPGGAEEWAFLESFEQQYGAVHPFFYACRFKDVLKLAEQDKKLVFVYLHSPEHPFTHMFCKETLCSELVTEFLDVNFVCWGALADRGEGPHMVAALRPVSFPFCAVIASVPGDTMAVLQQIEGPLSPAELVEVLQRTVEEQGLAFGVGSSAKAKQEEKIRADRRLREEQDAAYLAALQADREKEELRNLPSRERVQKPVEALNTRNYEKPKNIAVSKHNTKGNEFATTPEHQNKGVPNRGGQSQATQILIRFPNGERREHSFQCTDKLQSVFSFIDSLGLPGIANYRLVSNFPRRVFGVDQMRMTLKDAGLHPKASLFLEPMPM 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0746 382 CDD UAS 88 198 - -
Dere03g0746 382 SMART 45neu3 67 193 IPR006577 -
Dere03g0746 382 PANTHER FAS-ASSOCIATED PROTEIN 8 378 - -
Dere03g0746 382 SUPERFAMILY Thioredoxin-like 62 201 IPR036249 -
Dere03g0746 382 CDD UBX 306 378 - -
Dere03g0746 382 Gene3D - 298 379 - -
Dere03g0746 382 Pfam UBX domain 301 378 IPR001012 GO:0005515
Dere03g0746 382 SMART ubx_3 295 379 IPR001012 GO:0005515
Dere03g0746 382 ProSiteProfiles UBX domain profile. 299 377 IPR001012 GO:0005515
Dere03g0746 382 Gene3D Glutaredoxin 63 205 - -
Dere03g0746 382 SUPERFAMILY Ubiquitin-like 297 379 IPR029071 -
Dere03g0746 382 MobiDBLite consensus disorder prediction 281 301 - -
Dere03g0746 382 Coils Coil 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0746 Dere-ChrDere03 11919202 11923335 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0746 03 11919202 11923335 Dere03g0746 03 11919202 11923335 ECH