Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0706 ATGGGCTCTACTCTAGTGATCAAGGTCAGATATGGAGATACCCTCAGGCGCTTTAATGCTCGGGTAAATGAGAATAATCAACTGGATCTTGATGTTGCCAGATTAAGGGCAAAGATAATTGCACTTTTCAATTTCCCCACCGATGCCAATTTCATGCTGAGATATGTTGACGAAGATGACGACTTGGTGACACTAGTTAATGATGATGATCTGCATGATGTGATGAGGCAGAAGCTAAAGTTCTTAAGAATTGATATACATAATAGCGATGAAAATGGTGGTGAATACAATACTACTCGTGTAAATGCCATCCCCTTAAGATCTCCTCCTGTCAAGAATCAATGTGTGAGTGGCAATAATGCTGTTGCTAATCTATTGAAGTCTTTGCCAGAACCCTTACCTCAGTTTCTTTCCAATTTGACACTCTACTTGACTTCAGGGACTGTGTCTCTAGGTCCAGTGGCTGACACTCTTGCTGATTACATTTCCAAAATGATACAATCGTTGCTAGATTCTGATTGTCAGGTAGAGGATGAAAATGTAAATAGAGTTGTAGCGATACCAATTGCCCCTATTGATCCCAATCCATCTCAAGTGATAAATCTCAATACTGCACCAGTTTCATCTGCAGTCTGTGATGGTGATGGTAAAGAGGGGAAAATGGCAACTTTTGTTAAGGATGATATTTGTTCTGTATCTGCTAGTTATGGTGATCCTAATATCAGCTCAATGCCGACTACTGTGATGGATTCTGGTCTCACTGACACCATGGGCAGTATGTGTCATAAGAGTTTCCGCTGTGTTGGCTGTGGTGTTTCTTTAATAGATGGGCTTTGTTTTCAATCAGAAGCTGGCAAACAAAACTATGATCTGTGCAGCACTTGCTTCAATTGTTTGCATAATGAGACTATCAGAATGGACCTACCTGTGTGTGATCATTCCCCACAATCCTTGAAGGATCTGTCTTGCAAGGATTCTCCAACATTACCCCAATTTTTTCAAACAGGTGCCATTTTCAAGCATGTGAGGCCCAAGCTGGATAGCCAATTCACTTTTGATGTCAATGTAAAAGAAGGTACTATGATGGCCCCATCTACTAGGTTTACGAAGATCTGGCGTATGCGCAACAATGGCACAATAGTGTGGCCTCAGGGAACTCAACTTGTTTGTATTGAAGGAGATAAATTTAGTGACTTGCATTCTGTGAATTTAGAGCATGTTGGTCTTTTGAGCATTTTCATTGATCAAACATGCCAGATTCCTGCATATGGTGTACCTGTAGGCAAGGAATTTGACATTGCAGTTGACCTAAGTGCACCTCAGTTGCCTGGTAAATACATTTCATACTGGAGGATGGCATCCCCAACTGGTAAAAAATTTGGTCAACGTGTTTGGGTTCTTATTGAGGTTTATGGTTCTCTCAAGGAGTCATTGTGCGATAGCTCTCAAGGTCTAAACTTGAATATTCCCCTTGATGGAAGTGGTCCAAGTGGGCCTAAGGTTATAGATATTAACATTCAACCTATTGTGGATGATGCTTCTCTTCAATCTTGCAATTCTAATGCTTCAGCAGAACTTGAGAAGCAAATGGTTAACAACCAATCCAGGCAAGAGCTGGAAAATAACTTTTCTATACATGATGCTACATCCATTGGCCATGTTATAAATTTATCTGAAACTGCCCCAGCTTTTCCTGCTGTGGATGATACCTTTCTTCAATCCTGCAATTCTAATGCTTCCACGCAACCTGAGAATCAATTTGTTTTGCAAATCTCTGCTGCGGATGTACCATCATCATCTCTAGTTGACAAAATTGGACTTCTAGAGGTGGCTCTCCTCGAAGAGCTTCGGGAAATGGGTTATGAGTACAATCTGGAGCAGTCTCTGGATGATCTTTCTGGTGCTTCTTTGTGGGATCCTATCATTGGAAGATTTAAGAGAACTAGTCTTCGAGTTCCAGCACTACTCCTTCACTCTGTACAGTATGACATTGAAGCTGGATCCAAATTTAAGATGGAATCTACTGTTGAAGACTGTTCCTGTGAGCACATTCTACAGAGAGATATCAGAGCAATAAGGATGACCTCTCGTGACTACCACGCTCACATTTCTCGAGTGCACAGGACGCCTACTATTCTCACCGACGTCCCTCAGTACCCCAATGCCCACCAGGCCTTCAACAGGAGGGTCGTTTATGAGGAAGATGAAACACCTCACTACCACCATCGCCACCACCACTACAACCCAGAGGAACGAGAGAGGGTTGAAGTGATTGAGTACAAGGAGACTGACAACTATGGGAACAGGGAAGTCGTCTACGAGGAGGATATTGATGTTGAGGAATCCCGCAGGAGGAACAACGGTGGCTTCGCGCTGCAGAAGTGGAAGACCTTCAGGCCATAA 2403 0.4266 MGSTLVIKVRYGDTLRRFNARVNENNQLDLDVARLRAKIIALFNFPTDANFMLRYVDEDDDLVTLVNDDDLHDVMRQKLKFLRIDIHNSDENGGEYNTTRVNAIPLRSPPVKNQCVSGNNAVANLLKSLPEPLPQFLSNLTLYLTSGTVSLGPVADTLADYISKMIQSLLDSDCQVEDENVNRVVAIPIAPIDPNPSQVINLNTAPVSSAVCDGDGKEGKMATFVKDDICSVSASYGDPNISSMPTTVMDSGLTDTMGSMCHKSFRCVGCGVSLIDGLCFQSEAGKQNYDLCSTCFNCLHNETIRMDLPVCDHSPQSLKDLSCKDSPTLPQFFQTGAIFKHVRPKLDSQFTFDVNVKEGTMMAPSTRFTKIWRMRNNGTIVWPQGTQLVCIEGDKFSDLHSVNLEHVGLLSIFIDQTCQIPAYGVPVGKEFDIAVDLSAPQLPGKYISYWRMASPTGKKFGQRVWVLIEVYGSLKESLCDSSQGLNLNIPLDGSGPSGPKVIDINIQPIVDDASLQSCNSNASAELEKQMVNNQSRQELENNFSIHDATSIGHVINLSETAPAFPAVDDTFLQSCNSNASTQPENQFVLQISAADVPSSSLVDKIGLLEVALLEELREMGYEYNLEQSLDDLSGASLWDPIIGRFKRTSLRVPALLLHSVQYDIEAGSKFKMESTVEDCSCEHILQRDIRAIRMTSRDYHAHISRVHRTPTILTDVPQYPNAHQAFNRRVVYEEDETPHYHHRHHHYNPEERERVEVIEYKETDNYGNREVVYEEDIDVEESRRRNNGGFALQKWKTFRP 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0706 800 PANTHER OVARIAN CARCINOMA ANTIGEN CA125-RELATED 1 641 - -
Dere03g0706 800 SMART PB1_new 4 89 IPR000270 GO:0005515
Dere03g0706 800 Gene3D Immunoglobulins 340 473 IPR013783 -
Dere03g0706 800 CDD NBR1_like 344 470 IPR032350 -
Dere03g0706 800 Pfam PB1 domain 5 84 IPR000270 GO:0005515
Dere03g0706 800 Gene3D - 2 88 - -
Dere03g0706 800 Pfam Ig-like domain from next to BRCA1 gene 355 470 IPR032350 -
Dere03g0706 800 ProSiteProfiles PB1 domain profile. 4 89 IPR000270 GO:0005515
Dere03g0706 800 SUPERFAMILY CAD & PB1 domains 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0706 Dere-ChrDere03 11371655 11378434 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0706 03 11371655 11378434 Dere03g0706 03 11371655 11378434 ECH