Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0670 ATGCTTCTGTCCCCTGCTTTAGCGTACGCACGCCCTCTCAAGCATCTCTTAACTTCCACTCTCTTCCACCATAATCGACGCTCTCGCTCTCTGCTAGCTCAATCCGCCATCACCACTAATCTTTCATTCTCTCTGCTGTTCCCTAATTCTAGTTTCCTCACGGGAAACTCTCTCTTTTCGACGATGCAGCAATTCTGGTCTGGGAGTGGCATCAACAAGAACAAAGCAATGGTGGAGAATTTGCAACGCTATGGAATAATATCATCCAAAAAGGTAGCTGAAGTAATGGAGACTATAGACAGAGCTTTGTTTGTGCCTGATGGAACCCCACCTTATGTTGATAGCCCTATGGCAATAGGCTATAATGCCACTATATCTGCACCTCATATGCATGCCATGTGCCTCCAGTTGCTGGAGCAGAATTTGCAGCCTGGGATGCATGCTCTGGATGTTGGCTCTGGAACTGGGTATCTTACAGCATGCTTTGCTTTGATGGTTGGACCCCAAGGCCGTGCTGTTGGGGTGGAGCATATTCCTGAATTGGTATCCTCTTCATTAGAGAATATTCAGAAAAGTGCGGCAGCTCCGCTATTGAAAGATGGTTCCCTCTCAGTGCATGTTGGCGATGGAAGGAAAGGTTGGCCAGAGTGTGCCCCGTACGATGCCATTCATGTTGGAGCAGCGGCACCAGAAATCCCCCAAGCACTTATAGACCAGTTGAAACCTGGAGGTAGAATGGTGATTCCTGTTGGAAACGTATTTCAGGATTTAAAGGTAATTGAAAAAAAATCTGATGGTTCTATTAGCGTCCGGAGTGAGACTTCTGTTCGTTATGTGCCTCTCACTAGTCGAGATGCTCAACTGCGAGGCTACTGA 876 0.4726 MLLSPALAYARPLKHLLTSTLFHHNRRSRSLLAQSAITTNLSFSLLFPNSSFLTGNSLFSTMQQFWSGSGINKNKAMVENLQRYGIISSKKVAEVMETIDRALFVPDGTPPYVDSPMAIGYNATISAPHMHAMCLQLLEQNLQPGMHALDVGSGTGYLTACFALMVGPQGRAVGVEHIPELVSSSLENIQKSAAAPLLKDGSLSVHVGDGRKGWPECAPYDAIHVGAAAPEIPQALIDQLKPGGRMVIPVGNVFQDLKVIEKKSDGSISVRSETSVRYVPLTSRDAQLRGY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0670 291 PANTHER PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE 63 288 IPR000682 GO:0004719|GO:0036211
Dere03g0670 291 Pfam Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 73 285 - -
Dere03g0670 291 ProSitePatterns Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 208 223 IPR000682 GO:0004719|GO:0036211
Dere03g0670 291 NCBIfam protein-L-isoaspartate O-methyltransferase 73 287 IPR000682 GO:0004719|GO:0036211
Dere03g0670 291 FunFam Protein-L-isoaspartate O-methyltransferase 65 291 - -
Dere03g0670 291 CDD AdoMet_MTases 149 250 - -
Dere03g0670 291 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 74 259 IPR029063 -
Dere03g0670 291 Gene3D Vaccinia Virus protein VP39 66 291 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0670 Dere-ChrDere03 10873547 10876520 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0670 03 10873547 10876520 Dere14g0664 14 7079641 7082356 CCT
Dere03g0670 03 10873547 10876520 Dere03g0670 03 10873547 10876520 ECH