Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0623 ATGGCGCTTTACCTTCTCTACGAGTCCGCGTCTGGCTATGCCCTATTCCATGCTCGTGGCCTCGACGAAATTGGCCAGAACACCGAAGCGGTTCGGAACTCTGTTTCCGACTTGAACAGGTTCGGCAAGGTCGTGCAGCTTACGGCATTTAGTCCTTTTCAGTCTGCTTTTGATGCCCTTAAGCAATGCAACTCTGTTTCTGAAGGCCTGTTGACTGATGAGCTAAGGAGTTTTTTGGAGATTAATCTCCCTAAAGTTAAGGGAAGTAAGAAGGCGAAGTTCAGTTTAGGCGTAGTAGATCCTAAGATTGGTTCCCAGATCTCTGAAGTGACTAAAATTCCTTGTCAAAGTAATGAGTTTGTGGGTGAGCTGCTTCGTGGTGTCCGACTTCATTTTGATAGGTTTATCAATGATCTCAAGCCCGGAGATTTGGAAAAAGCACAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAAGTGAAATTTAATGTCAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGATACACTTGATAAGGATATCAATTCCTTTTCCATGAGAGTCAGGGAATGGTACTCATGGCATTTTCCTGAACTAGTGAAGATTGTAAATGATAACTATCTATATGCCAAAGTTGCAAAATATATTGAAGATAAGGCGAAGTTGTCTGAGGACAAAATCTCAGGCTTAACAGACATAGTTGGAGATGAAGATAAGGCAAAGGAGATTGTGGAAGCTGCTAAGGCATCCATGGGACAAGATTTGTCTCCAGTGGACCTGATTAATGTCCAGCAATTTGCACAGAGGGTAATGGACCTATCTCAGTATAGAAGGAAGCTTTATGATTATCTTGTTACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGTGCTCGATTGATTTCGCATGCTGGAAGCCTCACAAATTTGGCAAAGTGCCCATCTTCTACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATATGGTCTGATATTCCATTCGTCTTTTATTGGTCGAGCATCTGCCAGAAATAAGGGTCGAATGGCTCGCTATCTTGCAAATAAGTGTTCAATTGCATCACGCATTGACTGCTTTTCCGAAAGGGGTACTACAACTTTTGGTGAGAAACTTCGTGAACAAGTTGAGGAGAGACTTGACTTTTATGACAAGGGAGTTGCCCCTCGTAAGAACATTGATGTCATGAAGGCTGCTATTGAAAGTGCTCACAACAAAGATTGGGAGATGGAAACAGAAGTGCCTACTGAAGTATCAAGCAAGAAAGGCAAAAAGAAGCCAAAAGCTGCTGCTGCTGCGGATGCCATTGAGGACATGGCTGCAGATAAGCCCACAGCAATTACAAATGGCCATGCGTCAGAGGATCATAAATCAGAAAAGAAAAAGAAGAAAGAAAAGAGGAAATTGGACCTGGAGACTGAGGTGCAGGATATGGCTGTTGATGATGATGCCAATGGGGTTAATGTAGAGCAAAATGGAGAAGTTAAAAAGAAGAAGAAGAAAGATAAGAAATATAATGATGGGGAAGTCCAGGAGGCTTCTGTTGAGACCAAGAAGAAGAAGAAGAGATCCAAAAGTGAGCATGATGAATGA 1677 0.4246 MALYLLYESASGYALFHARGLDEIGQNTEAVRNSVSDLNRFGKVVQLTAFSPFQSAFDALKQCNSVSEGLLTDELRSFLEINLPKVKGSKKAKFSLGVVDPKIGSQISEVTKIPCQSNEFVGELLRGVRLHFDRFINDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKYIEDKAKLSEDKISGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSQYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFSERGTTTFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAIESAHNKDWEMETEVPTEVSSKKGKKKPKAAAAADAIEDMAADKPTAITNGHASEDHKSEKKKKKEKRKLDLETEVQDMAVDDDANGVNVEQNGEVKKKKKKDKKYNDGEVQEASVETKKKKKRSKSEHDE 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0623 558 MobiDBLite consensus disorder prediction 435 461 - -
Dere03g0623 558 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Dere03g0623 558 MobiDBLite consensus disorder prediction 474 558 - -
Dere03g0623 558 SMART NOSIC_2 170 222 IPR012976 -
Dere03g0623 558 SUPERFAMILY Nop domain 163 412 IPR036070 -
Dere03g0623 558 Gene3D Nop domain 299 422 IPR042239 -
Dere03g0623 558 Gene3D - 141 298 - -
Dere03g0623 558 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 3 550 IPR045056 GO:0030515|GO:0031428|GO:0032040
Dere03g0623 558 MobiDBLite consensus disorder prediction 477 503 - -
Dere03g0623 558 MobiDBLite consensus disorder prediction 435 460 - -
Dere03g0623 558 FunFam Nucleolar protein 56 299 411 - -
Dere03g0623 558 MobiDBLite consensus disorder prediction 520 558 - -
Dere03g0623 558 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Dere03g0623 558 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Dere03g0623 558 FunFam Nucleolar protein 56 140 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0623 Dere-ChrDere03 10357017 10360421 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0623 03 10357017 10360421 Dere03g0623 03 10357017 10360421 ECH