Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0608 ATGTCGGCCATGGGAGAGAGTCCACGAAGCCCAGAGGCGAAGCTGGGTATGCGAGTGGAGGATCTGTGGGATGTTCAGGAGCCACAGTTAAGTCCTAACGAGAAGCTCAACGCTTGCTTCGAAAGCATCCCGGTGTCTGCTTTCCCTTCAGCTCCTACAAATAAAGTGGTTGAGATAAAATCAGACGCCACCCTGCCGGAAGCTGTTGAAATACTGGCACACAACAATATCCTGAGCGCACCAGTGGTGGATGTTGACGCACCTGAAGGTGCTAGTTGGATTGACAGATATATCGGAATAGTTGAGTTTGCGGGAATTGTTGTTTGGATCCTGCAGCAGTCTGAACCTCCGTCTCCTAGGAGTCCAACCAGTGGATGTGCTATTGCAGCTGCACTTAATGGATTGACTTATAATCAAGAACTTGGAGGCTTAGGCCCTGGATCTGCTGCAGCAACTTCAGGAAACTATTTTGAGGATCTGACTTCTTCTGAATTTTATAAAAAAACCAAGGTTTGTGATATTTCAGGGTCATTCCGCTGGGCCCCATTTCTTGCGTTGCAGAGATCAAACTCTTTTCTGACCATGCTCTTGCTACTTTCCAAGTACAATATGAAGAGTATTCCTGTGGTAGATTTGGGTGCAGAAAGAATTGATAATGTTATAACACAGTCTGGTGTTATTCATATGTTGGCAGAATGTGTGGGGCTTCAGTGGTTTGAGAGTTGGGGAACCAAGACAATATCCGAAGTTGGTCTTCCTGTGATGACACCTGATTGTATCATCAAGGTTTATGAGGATGAACCAGTGCTTCAGGCATTTAAATTGATGAGGAAAAAGAGAATTGGAGGGGTACCCGTAATTGAAAGGGGTAGCAGCAAGGCTGTGGGTAACGTAAGCCTTCGAGATGTTCAATTCTTGCTAACTGCTCCAGAAATTTACCATGATTATAGAGCTATTACAGTAAAACACTTTCTGACAGCAGTTAGAAGGTACTTAGAGAAGCACAAAGAGGGCTTCCCCATGTTAGGCGACTTGGTTACATGCAAAAAGGACTGCACAATCAAAGAATTAATACAATTGCTTGACCATGAGAAGATTCATCGGATATATGCTGTAAATGATGATGGTGATCTGGAAGGAGTGATCACACTTAGAGATATCATCTCAAGGCTAGTACACGAGCCCCGAGGCTATTTTGGTGATTTCTTTGATGGTGTGCTTCCCCTGCCTCCAGACAGCCGGGTTTAA 1248 0.4479 MSAMGESPRSPEAKLGMRVEDLWDVQEPQLSPNEKLNACFESIPVSAFPSAPTNKVVEIKSDATLPEAVEILAHNNILSAPVVDVDAPEGASWIDRYIGIVEFAGIVVWILQQSEPPSPRSPTSGCAIAAALNGLTYNQELGGLGPGSAAATSGNYFEDLTSSEFYKKTKVCDISGSFRWAPFLALQRSNSFLTMLLLLSKYNMKSIPVVDLGAERIDNVITQSGVIHMLAECVGLQWFESWGTKTISEVGLPVMTPDCIIKVYEDEPVLQAFKLMRKKRIGGVPVIERGSSKAVGNVSLRDVQFLLTAPEIYHDYRAITVKHFLTAVRRYLEKHKEGFPMLGDLVTCKKDCTIKELIQLLDHEKIHRIYAVNDDGDLEGVITLRDIISRLVHEPRGYFGDFFDGVLPLPPDSRV 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0608 415 SUPERFAMILY CBS-domain pair 29 231 IPR046342 -
Dere03g0608 415 Pfam CBS domain 254 303 IPR000644 -
Dere03g0608 415 Pfam CBS domain 52 88 IPR000644 -
Dere03g0608 415 Pfam CBS domain 344 392 IPR000644 -
Dere03g0608 415 CDD CBS_pair_SF 260 388 - -
Dere03g0608 415 CDD CBS_pair_SF 196 303 - -
Dere03g0608 415 SUPERFAMILY CBS-domain pair 219 401 IPR046342 -
Dere03g0608 415 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 37 391 - -
Dere03g0608 415 ProSiteProfiles CBS domain profile. 341 399 IPR000644 -
Dere03g0608 415 Gene3D - 45 237 IPR046342 -
Dere03g0608 415 Gene3D - 243 394 IPR046342 -
Dere03g0608 415 ProSiteProfiles CBS domain profile. 255 316 IPR000644 -
Dere03g0608 415 ProSiteProfiles CBS domain profile. 52 118 IPR000644 -
Dere03g0608 415 SMART cbs_1 344 392 IPR000644 -
Dere03g0608 415 SMART cbs_1 182 231 IPR000644 -
Dere03g0608 415 SMART cbs_1 55 111 IPR000644 -
Dere03g0608 415 SMART cbs_1 259 308 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0608 Dere-ChrDere03 10218137 10221196 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0608 03 10218137 10221196 Dere03g0608 03 10218137 10221196 ECH