Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0518 ATGGCCATGGCTTTCAGTCTTTCATTGCTATGTTCCTCCATTTATTATGGCAATGGCTTTCCGTATTCAAGCTCGTCTAGTCTGCGAACTTGGGTGCAGAGTAGACCCTTAAATTATAAATATCGGGGAGTAAAAATGGATGGTAATGGGACGAGCATGAGGAAAACAATTTTGCATGATCTCTATGAGAAGCAAAGACAGAGCCCTTATTATGACAATCTTTGCCGTCCCGTTACAGATTTGCTTCCATTGATTGCAAGTGGAATCAGAGGCGTCACCAGCAATCCTGCGATTTTCGAAAGAGGCATATCGTCATCCAGTGCTTACAACGAGCAATTGAGGGAATTATTTAATGCAGGGAAAGACATAGAAAATGCCTACTGGGAATTGGTTGTGAAGGACATACAGGATACCTGCAAACTCTTGGGGCCTATCTACAAAGAAAAAGACGGGGTTGATGGTTATGTGTCTGTTGAAGTTTCCCCTCGGCTCGCAGATGATACTAAAGGAACAATTGAGCAAGCAAAATGGCTCCATAAAATGGTTGGATGTCCTAACGTATATATAAAAATTCCTGCAACTAAAGAATCCATTCCTTCTATAAAGGAGGTCATTTCTCAGGGGATAAGTGTAAATGTAACTCTCATATTCTGTCTCCCTAGATATGAAGCAGTCATTGATGCTTACTTGGATGGACTTGAAGCTTCTTCCATGACTGATCTTTCTACGGTTCAAAGTGCCGCAGCTTTCCACATTAGTAGAGTAGATACTGTAATTGACAAGAAACTTACGGAGATTGGTACTGTTGAGGCTCTTGGTCTAAGAGGAAAGGCTGCAGTTGCTCAAGCAGTCTTAGCTTACCAGATTTATCAGAAGAAGTTTTCTGGTCCACGATGGGAGCGTCTGGAAAATAGAGGTGCCAAGAAGCAGAGGTTGATGTGGGCCTCAACAAATGTGAAAAATCCAGCTTACCCTGACACCCTATATGTTGCTTCTCTTATTGGACCAGATACAATTTCAACCATACCAGACCAAGCTCTTGAAGCGTTTATGGACCATGGTATTGTTTCAAGAACCCTTGATGATAATGTATCGGAGGCCCAAGGCATATACAATGCAATTGAGAATCTGGGAATTGATTGGAGTAGTGTTGGATCCCAACTAGAAAGTGAGGTGTTGGATTCTTTCACAAAATGCTTTGGTAATGTTCTTGAATGCCTGAAAAAGAAAGCAAAGTCTAGTGAATTGATCAACGTGTAG 1260 0.4167 MAMAFSLSLLCSSIYYGNGFPYSSSSSLRTWVQSRPLNYKYRGVKMDGNGTSMRKTILHDLYEKQRQSPYYDNLCRPVTDLLPLIASGIRGVTSNPAIFERGISSSSAYNEQLRELFNAGKDIENAYWELVVKDIQDTCKLLGPIYKEKDGVDGYVSVEVSPRLADDTKGTIEQAKWLHKMVGCPNVYIKIPATKESIPSIKEVISQGISVNVTLIFCLPRYEAVIDAYLDGLEASSMTDLSTVQSAAAFHISRVDTVIDKKLTEIGTVEALGLRGKAAVAQAVLAYQIYQKKFSGPRWERLENRGAKKQRLMWASTNVKNPAYPDTLYVASLIGPDTISTIPDQALEAFMDHGIVSRTLDDNVSEAQGIYNAIENLGIDWSSVGSQLESEVLDSFTKCFGNVLECLKKKAKSSELINV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0518 419 CDD Transaldolase_like 68 400 IPR004732 GO:0004801|GO:0005737|GO:0006098
Dere03g0518 419 Pfam Transaldolase/Fructose-6-phosphate aldolase 87 403 IPR001585 GO:0005975
Dere03g0518 419 Hamap Transaldolase [tal]. 58 417 IPR004732 GO:0004801|GO:0005737|GO:0006098
Dere03g0518 419 PANTHER TRANSALDOLASE 74 410 IPR001585 GO:0005975
Dere03g0518 419 SUPERFAMILY Aldolase 65 410 - -
Dere03g0518 419 PIRSF Trnald_Bac_Plnt 47 418 IPR004732 GO:0004801|GO:0005737|GO:0006098
Dere03g0518 419 NCBIfam transaldolase 80 404 IPR004732 GO:0004801|GO:0005737|GO:0006098
Dere03g0518 419 Gene3D Aldolase class I 56 412 IPR013785 -
Dere03g0518 419 ProSitePatterns Transaldolase signature 1. 91 99 IPR018225 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0518 Dere-ChrDere03 9026342 9029329 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0518 03 9026342 9029329 Dere03g0518 03 9026342 9029329 ECH