Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0391 ATGGCTTTCTGCACCAGGAAATCCACCGCCCTCCTCTCACATCTCAAATCTAAGACTCCCTTCCTTTTTGCGCCTTCGCTTCGACCTGCTTCTTCCACTTCTCTTTTCCATCATCATAGGAACTCATTACTGCAAATTCTCAGAAATCCCAGTGGAATCGCCAATCTTCTCTCTTCTCGTCGCTTTGAGTCCACTATAGCGCACCATCCTTTAAGCTCCATCAACGAAGCTGATGACAATCGGCAGGTAATAGATTTTCCCGGAGGAACAGTGAAATTCACCCCTGATTTGAGGTTTATATCTGAATCGCCTGAGGAGAGAACACATTGCTACCGTGTCCTTGATGACAATGGGCAGCCAATTTTGGACGCTAACTTTGTGAAGGTCGGCGAAGAAGTTGCAGTGAAGATGTATAATGACATGGTTACACTTCAAATTATGGACACAGTCTTCTATGAAGCACAAAGGCAAGGTAGAATTTCTTTTTATTTGACGACGATTGGAGAAGAGGCTATCAATATTGCTTCAGCTGCCGCACTTACCATGGATGATCTTATCTTCCCTCAGTATAGGGAACCAGGAGTACTCTTATGGCGTGGATTCACTCTACAAGAATTTGCAAATCAGTGTTTTTCTAATAAATTTGATAATGGTAAAGGAAGGCAGATGCCAGTCCATTATGGGTCAAACAAGCACAATTACATTACTGTAGCATCAACAGTTGCTTCACAACTTCCCCATGCTGTCGGTGCTGCATATTCCTTAAAGATGGACAAAAAGGATGCATGTGCTGTTACTTATTTCGGCGATGGTGGCTCAAGTGAGGGAGATTTCCACGCTGCTTTAAATTTTGCAGCTGTCAGGGAGGCTCCGGTTATTTTTATATGCCGGAACAATGGATGGGCTATCAGCACTCCTACTTCAGATCAGTTTCGAAGTGATGGAGTTGTTGTGAAAGGACGTGCATATGGAGTCCGTGGTATCCGGGTAGATGGTAATGATGTCCTGGCCATTTATAGTGCTGTTCAAGCTGCACGTCAAATGGCAGTAAATGAACACAGACCAGTTCTAATTGAGGCTCTAACATATAGAGTTGGACACCACTCTACATCAGATGATTCCACCAAGTATCGTCCAGCCGAAGAGATTGATAGTTGGAAACTGGCACGAGATCCTGTGTCTAGATTTAGAAAGTGGATTGAAGGGAATGGTTGGTGGAATGGTAAGGCTGAGTCAGAGCTCAGGAGCAATATGAGACAGAAGCTACTGCATGCAATTCAAGTGGCAGAGAAGGTAAGTAAACCTCCACTCGTTGACATGTTCACTGATGTTTATGATGTCGCTCCGTCCAACCTCCGCGAACAGGAGCAATCGTTGAAAGAGACTATAAAAAACCATCCACAAGATTACTCAACAATTATCTCTGTCTAG 1431 0.4403 MAFCTRKSTALLSHLKSKTPFLFAPSLRPASSTSLFHHHRNSLLQILRNPSGIANLLSSRRFESTIAHHPLSSINEADDNRQVIDFPGGTVKFTPDLRFISESPEERTHCYRVLDDNGQPILDANFVKVGEEVAVKMYNDMVTLQIMDTVFYEAQRQGRISFYLTTIGEEAINIASAAALTMDDLIFPQYREPGVLLWRGFTLQEFANQCFSNKFDNGKGRQMPVHYGSNKHNYITVASTVASQLPHAVGAAYSLKMDKKDACAVTYFGDGGSSEGDFHAALNFAAVREAPVIFICRNNGWAISTPTSDQFRSDGVVVKGRAYGVRGIRVDGNDVLAIYSAVQAARQMAVNEHRPVLIEALTYRVGHHSTSDDSTKYRPAEEIDSWKLARDPVSRFRKWIEGNGWWNGKAESELRSNMRQKLLHAIQVAEKVSKPPLVDMFTDVYDVAPSNLREQEQSLKETIKNHPQDYSTIISV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0391 476 CDD TPP_E1_PDC_ADC_BCADC 137 429 - -
Dere03g0391 476 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 79 474 - -
Dere03g0391 476 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 122 470 IPR029061 -
Dere03g0391 476 Gene3D - 79 474 - -
Dere03g0391 476 Pfam Dehydrogenase E1 component 141 435 IPR001017 GO:0016624
Dere03g0391 476 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 77 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0391 Dere-ChrDere03 7598001 7602454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0391 48 314 Acyl Lipid Metabolism Gene Families AT5G09300 74.254 3.24e-145 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0391 03 7598001 7602454 Dere03g0391 03 7598001 7602454 ECH