Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0249 ATGGGAGTTGGAGGCACTCTGGAGTACTTGTCTGATCTAATGGGAAGCGGACACTACCACAAGACGAGGATGAAGAAGAAGAAGCAGTTCCAGACTGTGGAGCTCAAGGTTAGGATGGACTGTGATGGCTGTGAGCTTAAGGTCAGAAATGCCCTCTCTTCTTTAGAAGGGGTGAAATCGGTGGAGATAAACAGGAAGCAGCAGAAAGTGACAGTGAGTGGGTATGTTGAAGCATACAAGGTGCTGAAGAAGGCTAAATCGACAGGGAAGAAGGCAGAGATATGGCCCTATGTGCCTTACAACTTAGTGGCTCAACCATATGCAGCTGCAGCTTACGACAAGAAGGCTCCTCCTGGTTATGTCAGAAACGTAGAGAGCACGGCCACCATTGGAAGCGTTGCGAGATATGAAGACCCTTACATCACCATGTTCAGTGATGACAACCCCAATGCCTGCTCTATTATGTAA 468 0.4808 MGVGGTLEYLSDLMGSGHYHKTRMKKKKQFQTVELKVRMDCDGCELKVRNALSSLEGVKSVEINRKQQKVTVSGYVEAYKVLKKAKSTGKKAEIWPYVPYNLVAQPYAAAAYDKKAPPGYVRNVESTATIGSVARYEDPYITMFSDDNPNACSIM 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0249 155 FunFam Heavy metal-associated isoprenylated plant protein 26 18 95 - -
Dere03g0249 155 ProSiteProfiles Heavy-metal-associated domain profile. 30 93 IPR006121 GO:0046872
Dere03g0249 155 SUPERFAMILY HMA, heavy metal-associated domain 30 96 IPR036163 GO:0046872
Dere03g0249 155 Gene3D - 18 96 - -
Dere03g0249 155 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 32 153 IPR045181 GO:0046872
Dere03g0249 155 CDD HMA 34 93 IPR006121 GO:0046872
Dere03g0249 155 Pfam Heavy-metal-associated domain 36 90 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0249 Dere-ChrDere03 6136987 6137563 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0249 03 6136987 6137563 Dere03g0249 03 6136987 6137563 CCT
Dere03g0249 03 6136987 6137563 Dere03g0249 03 6136987 6137563 ECH