Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0165 ATGTGGTGGATGATGGGAGAGACCGGAGGCCATTACTGTTCTAAGAAGACCGATGATTTGTGCGGCGATATTTGTGGCCAGGAATCAAGCCAAGTATCAGGGATGTCAAGAATTCGCTGCATTTTGCGTGGCTTGGATGTAAAAACCTACATATTTCTTATTGCTGTTGTCCCAATGTGTATCTTTGGAATATATCTGCATGGGCAGAAAATTTCATACTTTCTGCGGCCACTTTGGGAAAAACCACCCAAGCCTTTCAATGTTATCCCTCATTACTACAATCAAAATGTGTCAATGGAGAATCTCTGCAGACTTCATGGCTGGGGAATCCGTGCCTACCCAAGACGAGTTTATGATGCTGTGTTGTTCAGTAATGAGTTGGAGATACTGAACTTACGGTGGAGAGAATTGTATCCTTACGTAACAGAATTTGTCCTCCTTGAGTCAAATTCCACATTCACTGGATTGCCTAAGCCTCTGGTTTTTAAAAGCAACTGCGAGCAGTTCAAATTTGTTGAGCCCCGGTTAACCTATGGGACTATTGGTGGGAGATTTAAGAAAGGAGAAAACCCATTTATTGAGGAGGCATATCAGCGCGTAGCATTGGACCAGCTTCTTAAGATTGCTGGTATTTCAGATGATGACTTGTTGATTATGTCTGATGTTGATGAGATTCCAAGTGCTCACACTATCAACCTATTGAGGTGGTGTGATGACATACCTTCAATCCTCCATCTTCAGCTGAAGAATTATCTTTATTCCTTTGAGTTTCATGTGGATGATGACAGCTGGAGAGCTTCAATTCACAGGTATCAAAGTGCCAAGACAAGGTATGCTCATTTCCGCCAATCTGATAACTTATTGGCAGATGCTGGCTGGCATTGTAGCTTTTGTTTCCGCCGTATCAGTGATTTCATTTTTAAGATGAAAGCCTACAGCCACTATGATAGAGTAAGGTTCTCTCATTATTTAAATCCCAAAAGAATTCAGAAAGTAATCTGCAAAGGGGATGATTTATTTGACATGCTTCCAGAGGAGTATACTTTCAAGGAAATAATTGGTAAAATGGGACCAATACCCCATTCCTATTCTGCTGTTCATCTTCCTGCTTATCTTTTGGAGAGTGCAGAGAAGTTCAAATTTCTCTTGCCTGGAAATTGTGTGAGAGAGAGGGAATGA 1179 0.4139 MWWMMGETGGHYCSKKTDDLCGDICGQESSQVSGMSRIRCILRGLDVKTYIFLIAVVPMCIFGIYLHGQKISYFLRPLWEKPPKPFNVIPHYYNQNVSMENLCRLHGWGIRAYPRRVYDAVLFSNELEILNLRWRELYPYVTEFVLLESNSTFTGLPKPLVFKSNCEQFKFVEPRLTYGTIGGRFKKGENPFIEEAYQRVALDQLLKIAGISDDDLLIMSDVDEIPSAHTINLLRWCDDIPSILHLQLKNYLYSFEFHVDDDSWRASIHRYQSAKTRYAHFRQSDNLLADAGWHCSFCFRRISDFIFKMKAYSHYDRVRFSHYLNPKRIQKVICKGDDLFDMLPEEYTFKEIIGKMGPIPHSYSAVHLPAYLLESAEKFKFLLPGNCVRERE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0165 392 PANTHER BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE 35 391 IPR006813 GO:0003830|GO:0006487|GO:0016020
Dere03g0165 392 Pfam Glycosyltransferase family 17 45 390 IPR006813 GO:0003830|GO:0006487|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0165 Dere-ChrDere03 5081364 5083370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0165 1 392 Glycosyltransferase AT1G12990 78.061 0.0 676
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0165 03 5081364 5083370 Dere03g0165 03 5081364 5083370 CCT
Dere03g0165 03 5081364 5083370 Dere03g0165 03 5081364 5083370 ECH