Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0151 ATGGCAATGGTACCCCAGTTAATGCAGTCAAGGGCTAAACGCCTTCCAATATTAGCATCAGACGACAATGCATTGATTAAACAAATACTTGCCGGTCATGCTCCCGTTGACGGACATATTGACGTTAGACCTCTTCTTAGCGTCGCTCAAGACATCTTATGCCGTATCGTCTCTGCAATCCCTCCCATTGTTCAGGGGAAGCAAGCACAATTGGATGCGCTGGATGACAATGCCCTCCAGTCTGATACTCCCCACATGCTCGATAATTTGTCTCATACAATTAGCAAAGTTTCCTACCAGATATCGTACCAGTGTTCTGGTGGAGGAAACGGTCATTCAACTACTATGGAAATTCTGGGCATGCTTTCAAGCTACGCATGGGATTCAAAGGTGGTGATAGCATTAGCAGCCTTTGCAATGAAATTCGGGGAGTTCTGGTTGGCGACTCAGCTTTACGCCACCAACCATCTTGCTAAGTCGATTGCAATGTTGAAGCATATTCCTGAATCACTGGAACAAAAGAATATTCTGGGGCTGGGAAGCAGGTGTCAAGCAATCAGCAACATCGTTAAGGCCATGTTGGATGTGACCAATTGCATTGTGGAGTTTGAGGAGCTGCCCTCTCAGTTCATTACACCAGACACACCACAGATGTTGGTCGCCACCACTCTTATTCCGATTGGTGTCTATTGGACCATTCGGAGTATTGTGTGTTCTGCATTGCAAATTTCAGGCTTCATGAACATGAATCAACACATAATAGCATTGACGACAGAAGCTTGGGACCTTTCAAGTTTGATCCACAAGCTTAATAACATACACAGCCACCTTAGGACTCAACTTGCCCTATTCCATAGGCAGATAGACGACAACAAACAAAGTGATGCTTTTCAGACACTCGTGCGTCTTTTTGAAACATCACACCATGATAACTTGAAAATTCTCCAAGGTTTGATTCACTGCAAGGGTGATCAGCGACCACTTCTTGATGGTTCTACAAATAAAAGGGAAAGCATTGATGTGTTGAGGAGTAAAATTGTGTTGTTATTAATATCAGACCTCAATCTCTCTAATGAAGAACTTTTGATTCTTGGAGAAATGTATCAAGAGTCACGTCAGGAATCAGACATGTTTGAGATTCCATTCGATGTCCTTTGGCTTCCAGTTGTGAGCAAGGCAATCCCGTGGACTGAAGTGAAACAGAAGAAGTTGAAGGACCTGCAGTCAAGGATGCCATGGTACTCTGTTTATGACCCTTGGCTATCGGAGCAAGCAGTCATTAGGTACATTAGGGATGTGTGGGGTTTCAAGAAGAAGCCTATACTTGTTGTGTTGGACCAGCAAGGGAAGGTTGTCAACCTAAATGCATTACACATTATTTGGATTTGGGGAAGCTTGGCATATCCTTTCACCATCTCAATGGAGGAAGCTATTTGGGAGAAACAAACATGGGGACTTGAGCTGTTGGCAGATATCTTTCATCCGTTCCTTTTAACATGGATATCAGAAGGGAAATACATATGCTTGTATGGAGGAGAAGATATGGAGTGGATTAGGAAATTTACAAAGAGTGCATATGCAGTGGCTAATACTCTGCAATCACCACTGGAGATGATTTACATGGGGAAAAGCAATCCAGGGGAGAAAGTGGAGAAAAACAACGAAGTCATTGTTTCAGAGAAGCTTAGCCATGCCCTGGAGGACCTGACGTTAATTTGGTACTTCTGGGTCAGGGTCGAGAGCATGTGGCATTCCAAGTTAAAGCAGGGGAAGCAAGTAAATAGCGACCCCATAATGCAAGGGGTTATGAATATTCTAAGCTATGATAAAAGTGATGAAGGATGGGCTGTGATTAGCAGAGGGACAGAGAAGATGGTTAAAGCAAAAGGAGAAATATTTCTCCAGTGCCTGAACAACTATGAAAAGTGGAAGGATAAGGCAAAAGAGAAGGGGCTTTTACCAGCAATGGAAGATTACATACAAGAGCTCCGAACCCCACACCATTGCGAGCGCTTGATAGTGCCAGATAGCAATGGTAGAACCCCAGAGGATGTGGCCTGCGCTGAATGTGGCCGTCCCATGGAAAGGCTCTTCATGTATCGTTGCGGCACCGATTAA 2118 0.4419 MAMVPQLMQSRAKRLPILASDDNALIKQILAGHAPVDGHIDVRPLLSVAQDILCRIVSAIPPIVQGKQAQLDALDDNALQSDTPHMLDNLSHTISKVSYQISYQCSGGGNGHSTTMEILGMLSSYAWDSKVVIALAAFAMKFGEFWLATQLYATNHLAKSIAMLKHIPESLEQKNILGLGSRCQAISNIVKAMLDVTNCIVEFEELPSQFITPDTPQMLVATTLIPIGVYWTIRSIVCSALQISGFMNMNQHIIALTTEAWDLSSLIHKLNNIHSHLRTQLALFHRQIDDNKQSDAFQTLVRLFETSHHDNLKILQGLIHCKGDQRPLLDGSTNKRESIDVLRSKIVLLLISDLNLSNEELLILGEMYQESRQESDMFEIPFDVLWLPVVSKAIPWTEVKQKKLKDLQSRMPWYSVYDPWLSEQAVIRYIRDVWGFKKKPILVVLDQQGKVVNLNALHIIWIWGSLAYPFTISMEEAIWEKQTWGLELLADIFHPFLLTWISEGKYICLYGGEDMEWIRKFTKSAYAVANTLQSPLEMIYMGKSNPGEKVEKNNEVIVSEKLSHALEDLTLIWYFWVRVESMWHSKLKQGKQVNSDPIMQGVMNILSYDKSDEGWAVISRGTEKMVKAKGEIFLQCLNNYEKWKDKAKEKGLLPAMEDYIQELRTPHHCERLIVPDSNGRTPEDVACAECGRPMERLFMYRCGTD 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0151 705 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 11 703 IPR039299 GO:0010088
Dere03g0151 705 Pfam Sieve element occlusion C-terminus 474 703 IPR027944 -
Dere03g0151 705 Pfam Sieve element occlusion N-terminus 20 308 IPR027942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0151 Dere-ChrDere03 4964635 4968179 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0151 03 4964635 4968179 Dere03g0151 03 4964635 4968179 CCT
Dere03g0151 03 4964635 4968179 Dere03g0151 03 4964635 4968179 ECH