Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0144 ATGAATCCTCTTTGCTGCATTGCTCCCGTTTCGATCGATCGGGACCGGGCCAACCCTGTTGTGCCCAAATCACCTGGTCACTGTCAGTTAGGGCTAGATGCATCAGTAAAAACTGTCAACTGTGGTTCCAAACCCAGCTTTTCCATTCTTGATTCGTCAGTTAGTACTGATTCTAACAAAGCGTCGTTCACTTCAAATCACGATGACGAAGACGGGGTCAATGAAGCTAGAGATTCTAAGGTGTTCAGTGGCAGTGGCACTGTGGCTGGGATTTTGTACAAGTGGGTGAATTATGGCAAGGGTTGGAGGTCCAGGTGGTTCATACTTGACGATGGGGTGCTTTCCTATTACAAGATTCATGGTCCTGATAAGATTTGGATGAGTCCGGCCAGAGATAGGAGTGTCAGGGTGATCGGGGAGGAGTCCTCTAAGTATATGAAGAAGGCAAATTGGAATCTAAATCGGCTGGGAAGCGCCACCAAGCAATGCAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGCGCCAGCAAATCTGATGATAAGCGACTTTCCATATTTACTGGCACAAAAACTCTTCACTTGCGTTGTGTATCTAGAGAGGACAGAGCTATGTGGATTGAGGCACTGCAGTCTGCAAAAGATCTTTTCCCTAGATCTATAACAAGCAGCGATCTTGCAACCTCAGAAGATATTTCAGTGTCAACAGAGAATCTACGTTCTCGATTATCACAAGAAGGCATAAGTGAAGAAGTTATTAAAGACTGTGAATCAATTATGCTTTCTGAAGTCTCTTACATTCAAGACCGGCTGAAGTTTCTTCAGCAAAAACATGTGATGTTGTTGGACACCTTAAAACAACTAGAGACTGAGAAAATAGAGTTGGAAACTACTGTGGTGGATGAAACAAAGGAACGTGAGTCATATTGCGGACAAGGAAATAGAAGGTTTAGTGATTTCTATTCTGTCATGTCGGAGGGCAGTGCTACTGATTCTGTAGCTGATAATGAAAGTCAAGATGGAGCAGATATTGAAACAGATGATGATGATGGAACATATTTCGACACAAATGAATTTCTTTCTTCAGATGCTTTAAGAAGTGCATCCTACCGAAGTAGGGAAGGTATGGGAAATGGTTGTATATATGACAGAGATTCTTTCTTTTCTGATGGCTTGCACGGGTTGGAGAAGGGAATTAAAGATGTAAAATATCCATATGTCAAAAGAAGGGATAATTTACCTGAGCCAAAAGAGAAAGATAAGCCTGTTGGCTTGTGGTCAATTATTAAGGACAACATTGGCAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGCTTTGAAGACTTGGAGTATTCATACTTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCGGGCTATGCATCAACAGAAGGTCGACAGTGCAAACCTTTTAATCCTCTACTTGGGGAGACCTATGAAGCTGACTATCCAGATAAAGGACTCAAGTTTTTCTCTGAAAAGGTTAGTCATCATCCAATGATTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAATTCTGGGCAGACTCCAATTTGAAAGGTAAGTTCTGGGGGCGTTCTATTCAGCTAGATCCTGTGGGTGTCCTCACTCTTCAGTTCGAAGATGGTGAAACATTTCAGTGGAGCAAGGTGACCACTTCAATATACAATATCATACTAGGAAAAATTTATTGTGACCACTATGGTACTATGCGTATCAAAGGCAGTGGTAACTACTCGTGTAAGCTCAAGTTCAAAGAGCAATCTATCATAGACCGAAATCCACATCAGGTTCATGGGTTTATTCAAGACAATAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGATGGGGCAATGTACTATGTCCTCGGGGACCCAACTACAAAGCCTAAAGGATATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAGGGACACCTACGTTACTAAGACAAGATACAATCTATCCCCTTTTGCAATATCATTAAATGAAATAACACCTGGTTTATCGGAGAAGTTGCCTCCTACTGACTCAAGGCTGAGACCAGATCAAAGACATTTAGAAAATGGAGAATATGAGTTGGCAAATGCAGAGAAACTGAGACTTGAACAATTGCAGAGACAGGCAAGAAAGATGCAGGAAAGAGGGTGGCAACCTAGATGGTTCCAAAAAGACGAGGATGGTTCTTACCGATATGTAGGTGGCTATTGGGAAGCGAGAGAGAAAAAAAATTGGGATGGAATTCCTGATATATTTGGACAGTCTTGTGATTTGCCTTCATGCTCTGAGGAAACTATATTCTAG 2421 0.4197 MNPLCCIAPVSIDRDRANPVVPKSPGHCQLGLDASVKTVNCGSKPSFSILDSSVSTDSNKASFTSNHDDEDGVNEARDSKVFSGSGTVAGILYKWVNYGKGWRSRWFILDDGVLSYYKIHGPDKIWMSPARDRSVRVIGEESSKYMKKANWNLNRLGSATKQCKPFGEIHLKVSSVRASKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRSITSSDLATSEDISVSTENLRSRLSQEGISEEVIKDCESIMLSEVSYIQDRLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGADIETDDDDGTYFDTNEFLSSDALRSASYRSREGMGNGCIYDRDSFFSDGLHGLEKGIKDVKYPYVKRRDNLPEPKEKDKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMIVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFIQDNRTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAALLWERDTYVTKTRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFQKDEDGSYRYVGGYWEAREKKNWDGIPDIFGQSCDLPSCSEETIF 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0144 806 Gene3D - 723 787 - -
Dere03g0144 806 Coils Coil 273 307 - -
Dere03g0144 806 MobiDBLite consensus disorder prediction 53 72 - -
Dere03g0144 806 FunFam oxysterol-binding protein-related protein 1D isoform X1 512 685 - -
Dere03g0144 806 ProSiteProfiles PH domain profile. 85 217 IPR001849 -
Dere03g0144 806 Pfam Pleckstrin homology domain 90 214 - -
Dere03g0144 806 Pfam Oxysterol-binding protein 427 780 IPR000648 GO:0008289
Dere03g0144 806 SUPERFAMILY Oxysterol-binding protein-like 422 793 IPR037239 -
Dere03g0144 806 FunFam Oxysterol-binding protein-related protein 2A 723 793 - -
Dere03g0144 806 Gene3D - 83 219 IPR011993 -
Dere03g0144 806 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 87 779 IPR000648 GO:0008289
Dere03g0144 806 SMART PH_update 86 219 IPR001849 -
Dere03g0144 806 SUPERFAMILY PH domain-like 86 217 - -
Dere03g0144 806 CDD PH_ORP_plant 88 221 - -
Dere03g0144 806 Gene3D - 512 678 - -
Dere03g0144 806 Coils Coil 734 754 - -
Dere03g0144 806 MobiDBLite consensus disorder prediction 330 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0144 Dere-ChrDere03 4892980 4899089 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0144 03 4892980 4899089 Dere03g0144 03 4892980 4899089 ECH