Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0109 ATGCCTCCCTCATATTTCCCACTTCGTTGGGAGAGCACAGGAGACCAATGGTGGTACGCGTCTCCGATTGATTGGGCAGCAGCGAATGGGATGTACGATCTGGTCGCGGAGCTTCTCCACCTCGACACCAATCTGCTCATTAAGCTCACGTCCCTCCGTCGAATCCGCCGCCTCGAAACCGTGTGGGACGACGAATCTCAATTCGACGACGTCGCTAAATGTCGGTCTCACGTTGCGAGGAATCTTCTGCGCGAGTGTGAAACAGGGAGAGGGCATAACTCTCTTATTCGTGCTGGCTATGGTGGGTGGCTTCTTTATACTGCTGCATCTGCTGGAGACGTGGATTTTGTTCAGGAATTGTTGGAGAGAGACCCATTTCTGGTGTTTGGAGAAGGAGAGTATGGAGTCACTGATATACTGTATGCTGCTGCTAGGAGCAAGAACTCTGAGGTCTTCCAGATTCTTCTTCATTCTGCACTTTCGCCCAGAGATTGCAGTGTCACTGAAGCAGAGTTGGATGAGAGTGGTCGGATTTTCAAGTGGGACATGATGAATAGGGCCGTTCATGCTGCCGCGAGAGGAGGGAATTGGGAGATACTGAAGCAGCTTCTTGGAAGCGTTACTGACATTTTAGCTTACAGAGATGCCCATGGATCCACAGTTTTGCACGCAGCAGCTGGCAGAGGGCAGGTTGAGGTGGTGAAAAATCTAGCAGAATCATCAGAAATTATCACCTCAACAGATGCACAAGGGAACACAGCCTTGCACGTGGCTTCGTACAGGGGTTACTCACCTGTGGTTGAGATCCTGATTCTTGCATCTCCTTCATTAGCATTGTTTACCAATCACTATGGCGACACTTTTCTTCATATGGCAGTGGCTGGTTTCAGAAGCCCAGGTTTCCAAAGACTGGACAAGCACACTGAGCTAATGAAGCGTGTAATACGTGGGAAGATTGTGAATATGCAGGACATTATCAATGTGAGGAACAATGAAGGAAGAACAGCTCTTCATGTAGCTGTGATTGATAACATCCAATGTGATGTAGTGGAATTACTAATGTCTGTCCCATCAATCGATTTGAACATTCGTGATGCTGATGGGATGACTCCTTTGGATCTTCTGAAGCAAAGACCACAATCAGCATCTTCTGAGATTTTGATCAAGCAGTTGATTTCAGCTGGAGGGATCTCTAATTGTCCTGATTATATGGCAAGAAATGCCCTTCTATCCCATCTGAAATCCCATGGCTTTAGTAGGAGTCCTGGAACTTCCTTTAGAATACCAGATGCAGAGATATTTCTGTACACAGGCATGGAGAATGCATCATCAGATGCCAACTATGATCAAGCAAGTGTAAAATCCAATTCTTGCTCAGGTGAACTTAGCAATTCCGAGTCAGCCAACTCCCCGTATAACAGCAAGTCTGGTTCTGTTAAATGTGCTGCAAGGCGCTTAAAATTTCTTCTGCGGTGGCGTAGGAAGAAAGATAGTGAAGCAGGTGCCTTAAAGCTGGAAGATGATGATGACAATGATTCAATATGTTCTTTCAGTTCAAGTAAAAACGTGGAAGACTTCCCAATCCCATTACGGCAAAAATATTCAAAACTCTGTTCTCTTCCAAACAACAAAAGAGCACTATCTATTAGGACTTATCTTCCAAGTCCATCCACCAAAGAGAAATTTACCGCAGGCCTAATGCAAGGCGTAATTCAGGTAAAGCCACATTTGGCTCTTCCTGGTCCCTTTTTTAGATCATCTGTGGCTTCACTCTCTTCCATTGATAAACAAAAGGGTGTTAATATCATGGGACCCTCTTGCTCCAATCGATCAATAGAAGAAGGTACACTACAACTCAACTATAGACAGGGTTCGTTCCGCAAGAGATTGATGAATCGGTATCTGTCTTTTGGAGCACAAGGACTTGCTGTGGAAGATTCAAATAGCTGCACAATGTCAAACCAGAGCTATAAGCGTTTCAGTTCTTTAGTTGCCTGA 1998 0.454 MPPSYFPLRWESTGDQWWYASPIDWAAANGMYDLVAELLHLDTNLLIKLTSLRRIRRLETVWDDESQFDDVAKCRSHVARNLLRECETGRGHNSLIRAGYGGWLLYTAASAGDVDFVQELLERDPFLVFGEGEYGVTDILYAAARSKNSEVFQILLHSALSPRDCSVTEAELDESGRIFKWDMMNRAVHAAARGGNWEILKQLLGSVTDILAYRDAHGSTVLHAAAGRGQVEVVKNLAESSEIITSTDAQGNTALHVASYRGYSPVVEILILASPSLALFTNHYGDTFLHMAVAGFRSPGFQRLDKHTELMKRVIRGKIVNMQDIINVRNNEGRTALHVAVIDNIQCDVVELLMSVPSIDLNIRDADGMTPLDLLKQRPQSASSEILIKQLISAGGISNCPDYMARNALLSHLKSHGFSRSPGTSFRIPDAEIFLYTGMENASSDANYDQASVKSNSCSGELSNSESANSPYNSKSGSVKCAARRLKFLLRWRRKKDSEAGALKLEDDDDNDSICSFSSSKNVEDFPIPLRQKYSKLCSLPNNKRALSIRTYLPSPSTKEKFTAGLMQGVIQVKPHLALPGPFFRSSVASLSSIDKQKGVNIMGPSCSNRSIEEGTLQLNYRQGSFRKRLMNRYLSFGAQGLAVEDSNSCTMSNQSYKRFSSLVA 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0109 665 ProSiteProfiles Ankyrin repeat region circular profile. 250 271 - -
Dere03g0109 665 SMART ANK_2a 18 47 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 250 279 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 367 400 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 217 246 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 332 363 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 134 164 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 100 129 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 183 212 IPR002110 GO:0005515
Dere03g0109 665 SMART ANK_2a 284 324 IPR002110 GO:0005515
Dere03g0109 665 SUPERFAMILY Ankyrin repeat 105 389 IPR036770 -
Dere03g0109 665 ProSiteProfiles Ankyrin repeat region circular profile. 217 239 - -
Dere03g0109 665 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 473 - -
Dere03g0109 665 Pfam Ankyrin repeat 333 365 IPR002110 GO:0005515
Dere03g0109 665 Gene3D - 13 417 IPR036770 -
Dere03g0109 665 ProSiteProfiles Ankyrin repeat profile. 250 282 IPR002110 GO:0005515
Dere03g0109 665 ProSiteProfiles Ankyrin repeat profile. 217 249 IPR002110 GO:0005515
Dere03g0109 665 Pfam Ankyrin repeats (3 copies) 189 271 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0109 Dere-ChrDere03 4466747 4469584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0109 189 374 Miscellaneous Gene Families AT2G31820 34.759 2.93e-19 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0109 03 4466747 4469584 Dere03g0109 03 4466747 4469584 ECH