Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0099 ATGACGGTGTTCGTAAACTCAGCCTCAGGGCTTAGAAAACAGATATTTCCTATTGACTACGAAACAGAGATTTCACAACGCCTCGTCGACGCTGCTCATCACGGCGACACTGATGCTGCTTTTGAATGTATAGCTAATCCTTTCGTCGACGTCAACTTCGTCGGAACGGTGAACTTCAAGTCCAAAACGACGGAGATTGTGTTGCACGACGAGTCGAGTCACGAAGTCCGCTTCGGATACGAGGAGTTCAAGACCGAGGTCACTGCTCTGTTTCTGGCTGCTCATGCTGGGAATTTGACACTCCTCAGGAAGCTACTGAATGTTGGAGCTAACGTGAATTTGAGATTGTTCCGTGGCTATGCCACAACAGCAGCGGTGAGGGGAGGCCATCTACAAGTAATAGAGATACTTATCAATGCTGGAGCGTCCCAGCCTGCATGCGAGGAGGCTTTGATGGAAGCAAGCCGCTTGGGACAGCCCAGATTTGCCGAGCTGCTCATGCAGTCCGACATGATACGTCCTCAAGTTGCTGTTCGTGTCCTCATCTCTGCCTGTTGCCGTGGATTCACTGAAGTTGTCGATGTACTCATCAAGCATGGAGTTGATGCCAATGCAATTGATAGGACGTTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTAATTGCAATGCATTGTTCGCTGCTGTTGTTAGCAGGCAGATTGATGTTGTGAGATTACTTTTGCAGGTTGGGGTAAGGACAGATATTGAGGTCAAACTGGGGGCTTGGATTTGGGAAACTGATACAGGAGAAGAATTTCGTGTGGGAGTGGGATTAGCTGATGCATACCCTATCGCCTGGTGTGCTGTGGAGTATTTTGAAGCTAGTGGAGCTATATTGCATATGCTGCTATGCCACTTCTCGCCCAACAGATTGCACTTCGGAAGGACTCTTTTGCACCATGCCATCCTATGTAACAATGAAAAAGCTGTGAGCATACTTCTAAATTGCGGTGCAGATGCAGAAATGGCAGTGCAAACTATTGAGGAAACCAATTTATACCCCATTCACATGGCTGCAAGGCTTGGATCATGCAACATTCTTCGTTCCCTACTCAATGCTAGTTGTAACTTAGACTACCAAACAAATTCTGGAGATACGGCATTAATTATCTCTTCAAGGCATAAGCATGAGAGTTGCCTCAGAGTCCTAGCATCAGCAGGTGCTGATTTGGGGCTGGTAAATTCATCTGGTCACTGTGCAACCTCAATTGCAAAATCGGTTCAGTGGACTAACATCTTCCAGAGAGCAATTTTGGACGTGATTCGAGCTGGAAAGGTTGTTAAATCGAGCAATGCCTCCAGATTTTCTGCTTTGATTTTTGTAACTCGTGCTAATGATTTTGAAGCTTTGAAGGGACTCATTGAACATAGAAACATAAATCTAGATGAGCAAGATGAAAATGGATTTTCAGCTGCCATGATAGCTGTAGCAGAAGATAAAGCAGAGGCTTTCAGGCTGCTTCTTAAAGCTGGAGCCGATGTTCTAAAGCTGAGAAATAAGCATGGTTTGACGGCCGTTGACCTTTTAAACATGAATAAATATGGGAAAATTTTTGGAAAAATGGTGCTTGAATTTGCACTTGAAAAGGGATTTAATGGATCCAATATTGCACTGCATCCTTTACATCAAGCTGCTCGCCATGGGGACATTGATTTTGTTCACAAATTAATAAAAAGACGGTTTGATGTCAATGCTTTTGATGATGATGGATACACCCCAATAATGTTAGCAGCAAGAGAAGGCCGTAGTGAAATGTGTGAGCTTCTGATCTCATGTGGGGCCGAATGTGATATTCAAAATGAGAGACATGAGAGTGCTCTTTCACTTGCAAGAGAAAATGGTGCCGGAAATGATGCAGAGCGTGTGATATTGGATGAGCTGGCTCGAAGACTAGTCTTGTGTGGGGCTCGTGTGAAGAAGCATACAAAGTGTGGGAAAGGGTCACCCCATAGTAAGGTACTAACGATGGTGGCGGGTGCTGGAATATTACGATGGGGAAAATCAAATAAGAGAAACGTGGTCTGTAAAGATGCAGAGGTTGGGCCCAGCGAAAAATTCAGATGGAACCGCAGGAGGAAGTTTGATGTTGATGAGCCAGGAATGTTCCATGTGGTCACGACAAAAAATAACGAGGTACATTTTGTATGTGGAGGTGGGGTTGAAATGGCTGGGTTGTGGGTAAGGGGGATTAAATTGGTGACGAGGGAAGCCATCTTTGGCAGAAAGAGCTAA 2280 0.45 MTVFVNSASGLRKQIFPIDYETEISQRLVDAAHHGDTDAAFECIANPFVDVNFVGTVNFKSKTTEIVLHDESSHEVRFGYEEFKTEVTALFLAAHAGNLTLLRKLLNVGANVNLRLFRGYATTAAVRGGHLQVIEILINAGASQPACEEALMEASRLGQPRFAELLMQSDMIRPQVAVRVLISACCRGFTEVVDVLIKHGVDANAIDRTLLQSSKPFLHANVNCNALFAAVVSRQIDVVRLLLQVGVRTDIEVKLGAWIWETDTGEEFRVGVGLADAYPIAWCAVEYFEASGAILHMLLCHFSPNRLHFGRTLLHHAILCNNEKAVSILLNCGADAEMAVQTIEETNLYPIHMAARLGSCNILRSLLNASCNLDYQTNSGDTALIISSRHKHESCLRVLASAGADLGLVNSSGHCATSIAKSVQWTNIFQRAILDVIRAGKVVKSSNASRFSALIFVTRANDFEALKGLIEHRNINLDEQDENGFSAAMIAVAEDKAEAFRLLLKAGADVLKLRNKHGLTAVDLLNMNKYGKIFGKMVLEFALEKGFNGSNIALHPLHQAARHGDIDFVHKLIKRRFDVNAFDDDGYTPIMLAAREGRSEMCELLISCGAECDIQNERHESALSLARENGAGNDAERVILDELARRLVLCGARVKKHTKCGKGSPHSKVLTMVAGAGILRWGKSNKRNVVCKDAEVGPSEKFRWNRRRKFDVDEPGMFHVVTTKNNEVHFVCGGGVEMAGLWVRGIKLVTREAIFGRKS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0099 759 ProSiteProfiles Ankyrin repeat region circular profile. 585 617 - -
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 309 341 IPR002110 GO:0005515
Dere03g0099 759 Gene3D - 18 176 IPR036770 -
Dere03g0099 759 SUPERFAMILY Ankyrin repeat 28 252 IPR036770 -
Dere03g0099 759 PANTHER ANKYRIN REPEAT-CONTAINING 22 742 - -
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Dere03g0099 759 Gene3D - 274 340 IPR036770 -
Dere03g0099 759 Gene3D - 539 696 IPR036770 -
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Dere03g0099 759 ProSiteProfiles Ankyrin repeat region circular profile. 309 335 - -
Dere03g0099 759 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Dere03g0099 759 Gene3D - 341 432 IPR036770 -
Dere03g0099 759 Pfam Ankyrin repeats (3 copies) 90 169 IPR002110 GO:0005515
Dere03g0099 759 Pfam Ankyrin repeats (3 copies) 548 616 IPR002110 GO:0005515
Dere03g0099 759 Pfam Ankyrin repeats (3 copies) 293 372 IPR002110 GO:0005515
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 585 617 IPR002110 GO:0005515
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 346 378 IPR002110 GO:0005515
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 552 584 IPR002110 GO:0005515
Dere03g0099 759 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Dere03g0099 759 SUPERFAMILY Ankyrin repeat 310 632 IPR036770 -
Dere03g0099 759 SMART ANK_2a 449 477 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 552 581 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 222 253 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 117 146 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 309 338 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 379 408 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 483 512 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 585 614 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 176 205 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 346 375 IPR002110 GO:0005515
Dere03g0099 759 SMART ANK_2a 85 114 IPR002110 GO:0005515
Dere03g0099 759 ProSiteProfiles Ankyrin repeat region circular profile. 552 584 - -
Dere03g0099 759 Gene3D - 433 538 IPR036770 -
Dere03g0099 759 Gene3D - 177 261 IPR036770 -
Dere03g0099 759 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0099 Dere-ChrDere03 4318773 4325710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0099 406 630 Miscellaneous Gene Families AT1G07710 25.652 3.81e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0099 03 4318773 4325710 Dere03g0099 03 4318773 4325710 ECH