Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2934 ATGGCCTATTCAAGTGCCCAAATTCACGGTCTTGGCACTCCATCTTTTCCTAGTTCATTGAAGAAGCCGAATTGTTCCGATTCCAGAACTGTATTTCTGGGTCAGAAGTTGAACAATTCATCTTATTATGGGTTTCCTTGGTCCGCATTTCTGAAGCTGAAGAACAATACCAGGAAACCAGTGAGGGTTGTTAATGAGAAAAAAGTGGGTATTGATTTGGGGACGACGAACTCCGCCATTGCTACTATGGAAGGTGGAAAGCCCACTATCATAACCAACGCCGAGGGTCAAAGGAGGATGCCGTCTGTGGTGGCTTATACCAAGAACGGCGATAGGCTTGTGGGTGAAATTGCGAAGCGGCAGGCGGTGGAAAACCCAGAGAACACCTTCTTTTCGGTGAAGAGATTCATTGGGAGAAAGATGTCCGAAGTGGACAAAGAATCGAAGGAGGTTTCGTACAAGGTGGTGAGCGATGAAAACGGAAATGTGAAACTTGAGTGCCCTGCCATCGGAAAGCAGTTCGCACCTGAAGAAATTTCAGCCCAGGTGTTGAGGAAGCTCGTGGATGATGCTTCAAAGTCTTTAAATGATAAAGTGACAGAGGTTGTAGTCACGGTTCCTGCATACTTCAATGTTTCCCAAAGGATTGCTACAGAGAATGCTGGTAGAATTGCTGGTTTAGAAGTTGTACGTATTATCACTGAACCACTTGCGGCTTCATTGGCATATGGTTTTGACAAGAAGAACAAACAAACTATCTTGGTAATTCACCTTGGAGGTGGCACTTTTGGTCTCTCAGTACTTGAGGTTGAGGATGAAGTGGTTGTAGTGCTTTCTGCCTCTGGGGATACACATTTGGGTGGTGATGATTTCGATAAGAAAATTGTTGACTGGCTGGTTGAAAAAGTCAAGAAAGATAAAGGTATAGATCTTTTGAAAGACAAACAAACTCTGCTGCGCCTCACTGAGGCAGCTGAAAAAGCGAAAATACAGCTTTCATCCTTGACGCAAACGAACATCAGCTTTACATTTAAAACTGATGATGGCCCCAAGCATATCGAGACAACCCTTACAAGGGATAAGTTCGAGGAACTGTGTAAAGACCTTCATAAAAGGCTCGAGAAACAAGTTAAAAATGCATTGAAGTATACAAAACTATCCTTTAAGGATATTGACGAGGTTATTCTTGTTGGTGGGTCAACACGAATTCCAGCTGTTCAGAAGCTTGTAAAGAAGGTGACTGGAAAGGACCCAAATGTTACTGTCAATCCAGATGAAGTAGTTGTCCTTGGTGCTGCAATTCTGGTGGGCTCTCAAGCTGCTAACATTGGTGTCTTGGCTGGAGATGTCAGTGACATTGTGCTTTTGGATGTTACTCCATTATCTCTGGGTTTGGAAACACTAGGTGGTGTGATGACAAAAATTATCCCTCGAAACACCGCTCTTCCCGCCTCGAAGTCAGAGGTCTTCTCAACAGCTGCTGATGGACAAACCAGCATAGATATCAATGTCTTTCAGGGCGAGAGTGAATTTGTTAGGGACAATAAATTCCTTGGTACCTTCCGCTTGGACAGAATCCCTCCTGCACCTCGAGGGGTTCCTCAATTTGAGGTGACATTTAACATTGATGTCAATGGCATTCTCTTGGTCACTGCCGTAGATAAGCGCACTGGGAAGAATCAAGACATCACTATTATTGGTGCAAGCACTTTGCCAAATGATGAGATAGGGAGGATGGTAAAGGAGGCTGAGAGGTTTGCAAAGGAGGACAAAAGTGTCACACCCTTAATTAAGGAGGTGTGA 1803 0.442 MAYSSAQIHGLGTPSFPSSLKKPNCSDSRTVFLGQKLNNSSYYGFPWSAFLKLKNNTRKPVRVVNEKKVGIDLGTTNSAIATMEGGKPTIITNAEGQRRMPSVVAYTKNGDRLVGEIAKRQAVENPENTFFSVKRFIGRKMSEVDKESKEVSYKVVSDENGNVKLECPAIGKQFAPEEISAQVLRKLVDDASKSLNDKVTEVVVTVPAYFNVSQRIATENAGRIAGLEVVRIITEPLAASLAYGFDKKNKQTILVIHLGGGTFGLSVLEVEDEVVVVLSASGDTHLGGDDFDKKIVDWLVEKVKKDKGIDLLKDKQTLLRLTEAAEKAKIQLSSLTQTNISFTFKTDDGPKHIETTLTRDKFEELCKDLHKRLEKQVKNALKYTKLSFKDIDEVILVGGSTRIPAVQKLVKKVTGKDPNVTVNPDEVVVLGAAILVGSQAANIGVLAGDVSDIVLLDVTPLSLGLETLGGVMTKIIPRNTALPASKSEVFSTAADGQTSIDINVFQGESEFVRDNKFLGTFRLDRIPPAPRGVPQFEVTFNIDVNGILLVTAVDKRTGKNQDITIIGASTLPNDEIGRMVKEAERFAKEDKSVTPLIKEV 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2934 600 Coils Coil 318 338 - -
Dere02g2934 600 Coils Coil 359 379 - -
Dere02g2934 600 FunFam Molecular chaperone DnaK 288 373 - -
Dere02g2934 600 ProSitePatterns Heat shock hsp70 proteins family signature 3. 394 408 IPR018181 -
Dere02g2934 600 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 438 599 IPR029047 -
Dere02g2934 600 Pfam Hsp70 protein 69 593 IPR013126 GO:0005524|GO:0140662
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 261 271 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 422 442 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 452 471 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 391 407 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 533 549 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 202 222 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 67 80 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 95 107 - -
Dere02g2934 600 PRINTS 70kDa heat shock protein signature 118 126 - -
Dere02g2934 600 ProSitePatterns Heat shock hsp70 proteins family signature 1. 71 78 IPR018181 -
Dere02g2934 600 Gene3D - 248 419 - -
Dere02g2934 600 PANTHER HEAT SHOCK PROTEIN 70KDA 69 591 IPR013126 GO:0005524|GO:0140662
Dere02g2934 600 SUPERFAMILY Actin-like ATPase domain 68 247 IPR043129 -
Dere02g2934 600 Gene3D - 131 182 - -
Dere02g2934 600 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 448 595 IPR029047 -
Dere02g2934 600 Gene3D - 69 434 - -
Dere02g2934 600 FunFam Molecular chaperone DnaK 69 253 - -
Dere02g2934 600 FunFam Stromal 70 kDa heat shock-related protein 444 569 - -
Dere02g2934 600 Gene3D Actin; Chain A, domain 4 287 372 - -
Dere02g2934 600 SUPERFAMILY Actin-like ATPase domain 250 436 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2934 Dere-ChrDere02 33440419 33444263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2934 69 597 Miscellaneous Gene Families AT5G28540 49.353 8.31e-156 461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2934 02 33440419 33444263 Dere02g2934 02 33440419 33444263 CCT
Dere02g2934 02 33440419 33444263 Dere02g2934 02 33440419 33444263 ECH