Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2898 ATGGCGAGGGAGACATTTCAATGTCGCATAAGCACTGAGCAGACCCACGCGGCCCACACCTTCTCGACGATATGCGCAGTCGTTGTTTCCTTTCAGTATATTCATCTTTCACCTTACAAAAATTCAGACGAAGCGACGATTCAGGCTAAAGCATTCAAGCAAAGTTGCTGTCTTCAGCAAATAATGGCTTCTTTCAATTCCTCCTACTCTTCAACAGCATCTCTCTCGCGCCCACGGGCATGCAAACACTTAAAATTGTTCAATGGGTTGCATTCTATGAATGCATCTCTTGTTCGTGGACTTAGATCTGATTTGGCAATTGGCCAATTGGATTCTAAATTCTCCTCCAGTGACAAGGGTGTTAGTAGAACCAAGGCAGCACTGATCTCTGGAGGAGGTGACCTTGTTTTTTCTTCAAATGGTAATGATGTTGAGAAACAACCTGAAGCAGTAGCATATGGAACTCTAGCAGTTGATACAGCGGTAACAAGCAATAATTTTCCGGTTGACAATGATGAATTTGATTTGGACAGCCCCACAGAAGGTTTTGCTTCCATCCCTGAGGCTATTGAAGATATACGCCAGGGAAAGATGATATTGGTTGTGGATGACGAGGACAGAGAAAATGAAGGAGACTTGATTATGGCTGCACAGTTGGCAACACCTGAGGCTATGGCTTTTATTGTAAAGCATGGAACTGGTATAGTTTGTGTAAGCATGAAAGAGGAAGATCTGGAGAGATTGGAACTTCCTTTGATGGTAGACAGTAAGGATAATGCTGAGAAACTTTGTACTGCATTCACCGTGACAGTGGATGCTAAACGAGGTACCACCACAGGGGTATCAGCCAGTGATAGGGCAACAACAGTCTTAGCTCTTGCATCCAGAGATTCAACACCGGCTGATTTCAATCGCCCAGGCCATATATTTCCACTAAAATATCGGGAAGGTGGTGTCTTGAAGAGAGCTGGGCATACAGAAGCTTCAGTTGATCTTACCATACTTGCTGGTTTGGAACCTGTGGCAGTTCTTTGTGAGGTTGTAGATGATGATGGTTCCATGGCTAGATTGCCAAAGCTTCGCCAGTTTGCAGAGCGTGAGAACTTGAAAATTATTTCTATTGCTGACTTAATCAGATATAGAAGGAAGAGAGATAAATTAGTAGATCAGGCTGGTGCTGCACAAATACCTACAATGTGGGGGCCATTCACAGCTTACTGCTATAGGTCGCTTTTAGACGGGATGGAACATATTGCAATGGTTAAGGGTGACATTGGAGATGGAAATAATGTTCTTGTGAGGGTACACTCTGAGTGTCTCACTGGAGACATATTTGGATCTGCCAGATGCGACTGTGGGAATCAGCTTGCACTTGCAATGCTGCAGATTGAGGCTGCTGGTAGGGGTGTCCTGGTATATCTCCGAGGACATGAAGGAAGGGGCATTGGGTTGGGCCACAAGCTTCGTGCCTATAACCTACAAGATGACGGACGAGATACTGTAGAAGCCAATGAGGAGCTGGGATTGCCTGTTGACTCGAGGGAATATGGTATTGGTGCTCAGATATTGAGGGACTTGGGTGTTCGATCAATGAAGCTGATGACCAACAATCCAGCAAAATATGTTGGCCTCAAAGGTTATGGTTTGACAATTTCTGGTAGGATCCCATTGGTAACCCTTATCACAAAGGAGAACAAGAGATATTTGGAGACAAAACGCGTCAAAATGGGCCACATTTATGGCAAGGAATCTTACAGCCAATTGAGCAGTTATGACAGTGGCAATGGTAAAGCCAATGTTGATGATTCTAATAATGCTGTTCCTGGCTCATGA 1833 0.4446 MARETFQCRISTEQTHAAHTFSTICAVVVSFQYIHLSPYKNSDEATIQAKAFKQSCCLQQIMASFNSSYSSTASLSRPRACKHLKLFNGLHSMNASLVRGLRSDLAIGQLDSKFSSSDKGVSRTKAALISGGGDLVFSSNGNDVEKQPEAVAYGTLAVDTAVTSNNFPVDNDEFDLDSPTEGFASIPEAIEDIRQGKMILVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLERLELPLMVDSKDNAEKLCTAFTVTVDAKRGTTTGVSASDRATTVLALASRDSTPADFNRPGHIFPLKYREGGVLKRAGHTEASVDLTILAGLEPVAVLCEVVDDDGSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLVDQAGAAQIPTMWGPFTAYCYRSLLDGMEHIAMVKGDIGDGNNVLVRVHSECLTGDIFGSARCDCGNQLALAMLQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPAKYVGLKGYGLTISGRIPLVTLITKENKRYLETKRVKMGHIYGKESYSQLSSYDSGNGKANVDDSNNAVPGS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2898 610 FunFam Riboflavin biosynthesis protein RibBA 388 559 - -
Dere02g2898 610 NCBIfam GTP cyclohydrolase II 393 579 IPR000926 GO:0003935|GO:0009231
Dere02g2898 610 CDD GTP_cyclohydro2 387 579 IPR000926 GO:0003935|GO:0009231
Dere02g2898 610 Gene3D GTP cyclohydrolase II 388 559 IPR036144 -
Dere02g2898 610 MobiDBLite consensus disorder prediction 588 610 - -
Dere02g2898 610 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 184 381 IPR000422 GO:0008686|GO:0009231
Dere02g2898 610 SUPERFAMILY YrdC/RibB 182 384 IPR017945 -
Dere02g2898 610 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 174 387 - -
Dere02g2898 610 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 181 385 IPR000422 GO:0008686|GO:0009231
Dere02g2898 610 PANTHER GTP CYCLOHYDROLASE II-RELATED 181 582 - -
Dere02g2898 610 Gene3D DHBP synthase 173 387 - -
Dere02g2898 610 Pfam GTP cyclohydrolase II 393 556 IPR032677 -
Dere02g2898 610 Hamap GTP cyclohydrolase-2 [ribA]. 386 582 IPR000926 GO:0003935|GO:0009231
Dere02g2898 610 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 182 578 IPR016299 GO:0009231
Dere02g2898 610 SUPERFAMILY RibA-like 387 557 IPR036144 -
Dere02g2898 610 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 188 380 IPR000422 GO:0008686|GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2898 Dere-ChrDere02 32585955 32596406 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2898 02 32585955 32596406 Dere02g2898 02 32585955 32596406 ECH