Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2662 ATGGCAAAGAGCTTTAGGTATAGTTCGTTTGGACAGGCAAATCTTGGTTGGAATCTGATCTCCAGTTTTGGTGGTCCATATAATCTTCTTGGAGATACTAACAGTTGCAGCAAAAGCAGCATCAATCAGAAACATTTTGTGCTGTACACTAGTATCTCATTGATGGATATGCAAGTTACTGATTCGGACTGGGAGACGTTAAGTGAGAGCAGCAGCAGCGAGGATCAAGAGGAAATTGATTTTCTATATGGTGGGCAAGCTCGGAGCATACTATCAAGTTTAGAGGAAAGCATTGGGAAAATTGATGATTTTCTCTCATTTGAAAGAACATTTGTTCATGGGGATGTGGTTTGCTCCTTGTCAGACCCATCTGGACAGATGGGCAGGGTTACAAGTGTTGATTTGTTTGTGGATTTGGAAAGTATTCAAGGAAAATTGTTAACAAATATAAACTCCAACAGGCTTTTGAAGATTTGCTCCATTTCAGAAGGTGACTATGTGATTAAGGGGCCATGGCTTGGACGGGTTCAAAGGGTAGTGGACAGAGTAACTGTATTATTTGATGATGGAGCTAAATGTGAGGTCACTGCCTTAGAAAGAGAGAAGATTTTACCCCTGACTCGTAATTTACTTGAAGACTCACAGTATCCATATTATCCAGGGCTGAGAGTAAGGGTTAATTCCCCAACTTCTTCTAAGTCAGCTAGATGGTTATGTGGAACTTGGAGAGACAATCAAGATGAAGGAACAGTTGGTGCTGTTGAAGCAGGTTTGGTGTATGTTAACTGGCTCGCGTCTGTTCCCGTGGATCCCAATTTTAATATGACTGTTCCCCCATGCTGGCAAGATTCCAAAAATTTGACCTTGCTGTCATGTTTTTCCCATGCAAACTGGCAGCTTGGTGACTGGTGCATACTTCCAGTGGGGGACCAAAAGGAACAGATGGAACAGAATTTTGGAAATTCATCTACTGGGGATCTTAATAAGGAGCACATTATGGTAAAAGAATATAAGAAAAGAAACCTTAACTCCAATATTGGGGAAATTTTTATAATTGGGAAAATAAGGACCAAAGTTGACATTGTATGGCAGGATGGTGAATATTCTTTGGGATTAGATCCTCACACTCTACTCCCAGTGAATGGCATAAACACTCATGAATTTTGGCCTCAGCAGTTTGTTCTGGAAAAAGGTGCTTCTGATGATCCTTATATGCCCAGCTGTCAAAGATGGGGTGTTGTCCAATGTGTGGATGCAAAAGAGCATATGGTAAAGGTACAATGGAATGCTGTTTCCATATCCGAGCCAGAGAATTTGGCTGCAGATAGGATGGAGGAAACTGTGAGTGCCTATGAACTCACAGAGCACCCAGACTACTCCTATTGTTTTGGTGATATTGTATTCAAGGCGGCTCAAAAACAGCTTGGTTACCAAGCTGATAAAGATCAAGCAAAGTCAGCAACTGACTTGAATGTGGGTCCTCTTTTGGACAGAAACCACATCAGTTCTCAGAATGAGTTCACTCATAACTGTTACCTGTCATGTATTGGCAATGTTACTGGTTTTACAGATGGTGCTGTAGAGGTGAAATGGGCCACTGGTTTAACATCCAAGGTTGCGCCTCATGAAATTTTTCGAATTGATAAACATGAAGGTTCAACAGAAACCCCTGTTCCTTATGAAGCAGATATTGCTGAGTTCACTCGAGAGATGACTGAAAATGGAAATCTAAGTTCTGACAGTAAGGGAAAGGGCTTGTTAGATTTTCATGGTGATAAAGGGAATTGTGAAAGACATCCAGGGGAATGTAGTTCCTTTTCCCTTCCTCGATCTGCCATTGAAATTTTCTCCAGCATAAAGGCCAGCATATTTCAAACATTTGGTGTAACATCATTTTTGGGAGCAGTTTCTTTAGTCCCTACATCTGAGGAGGGAAATCAATCTGAATATCTTGATAAGAAAGAAGTTTCAGAAACCAGTGACCTCGCCACCGAATCAAATCCAATGAGTGAATTGCGGTCTACCGAAAACATTACTCCAGATCAGGAGGTTAATAGGTTCAATGAGAGGAATGATCTTCCATCTTCTCCAGACAGCAACAATTCAGATCAGTTTAAGCGGTTTGATATACTAGATAATTGCTCAGACCACCACTTCTTTGATGAGGGAAAAGGGTTGGCTTTATCTCAGGTTAAAAGAGGATGGGTGAAAAAGGTTCAGCAAGAATGGAGCATCCTGGAGAGAAGTCTTCCTGAAACTATTTATGTCCGTGTGTTTGAAGAAAGAATGGATCTCCTGCGAGCAGCAATTGTTGGTGCACCTGGAACTCCTTATCATGATGGGTTGTTCTTCTTTGATATTTGTTTCCCTCCAGAATATCCCAATGAACCACCTATGGTGCACTACAATTCTGGTGGGCTCCGATTAAATCCTAATTTGTATGAATCAGGAAAAGTCTGTCTGAGTCTCCTAAATACATGGACTGGCACAGGCACTGAAGTGTGGAACCCAGGGGCCTCCACAATTCTTCAAGTCCTTCTCTCTCTACAGGCCCTTGTCCTCAATGAAAAGCCTTATTTCAATGAGGCTGGATATGACCAGCAGATTGGCAGAGCTGAAGGAGAAAAGAACTCAGTGAGCTATAACGAGAATGCTTTCCTTGTCACCTGCAAATCAATGCTGTATCTACTAAGAAAGCCGCCCAAGCATTTTGAGGCACTTGTGGAAGAGCACTTCAGCCAACGCTCCCAACATTTACTTCTGGCTTGTAAGGCGTATAGTGAAGGAGCTCCCGTTGGATGTGCATTCGGATGCGAAAAGACTGAGCAAGAAAGTCAGAAGGGAACTTCTATGGGGTTTAAAATTATGCTTGCGAAGCTCTTACCCAAGCTTGTAGAGGCGTTTTCTTATAAAGGAATTGATTGCAGCCAGTTTGTTCAGCTGCAAAACTAA 2952 0.4201 MAKSFRYSSFGQANLGWNLISSFGGPYNLLGDTNSCSKSSINQKHFVLYTSISLMDMQVTDSDWETLSESSSSEDQEEIDFLYGGQARSILSSLEESIGKIDDFLSFERTFVHGDVVCSLSDPSGQMGRVTSVDLFVDLESIQGKLLTNINSNRLLKICSISEGDYVIKGPWLGRVQRVVDRVTVLFDDGAKCEVTALEREKILPLTRNLLEDSQYPYYPGLRVRVNSPTSSKSARWLCGTWRDNQDEGTVGAVEAGLVYVNWLASVPVDPNFNMTVPPCWQDSKNLTLLSCFSHANWQLGDWCILPVGDQKEQMEQNFGNSSTGDLNKEHIMVKEYKKRNLNSNIGEIFIIGKIRTKVDIVWQDGEYSLGLDPHTLLPVNGINTHEFWPQQFVLEKGASDDPYMPSCQRWGVVQCVDAKEHMVKVQWNAVSISEPENLAADRMEETVSAYELTEHPDYSYCFGDIVFKAAQKQLGYQADKDQAKSATDLNVGPLLDRNHISSQNEFTHNCYLSCIGNVTGFTDGAVEVKWATGLTSKVAPHEIFRIDKHEGSTETPVPYEADIAEFTREMTENGNLSSDSKGKGLLDFHGDKGNCERHPGECSSFSLPRSAIEIFSSIKASIFQTFGVTSFLGAVSLVPTSEEGNQSEYLDKKEVSETSDLATESNPMSELRSTENITPDQEVNRFNERNDLPSSPDSNNSDQFKRFDILDNCSDHHFFDEGKGLALSQVKRGWVKKVQQEWSILERSLPETIYVRVFEERMDLLRAAIVGAPGTPYHDGLFFFDICFPPEYPNEPPMVHYNSGGLRLNPNLYESGKVCLSLLNTWTGTGTEVWNPGASTILQVLLSLQALVLNEKPYFNEAGYDQQIGRAEGEKNSVSYNENAFLVTCKSMLYLLRKPPKHFEALVEEHFSQRSQHLLLACKAYSEGAPVGCAFGCEKTEQESQKGTSMGFKIMLAKLLPKLVEAFSYKGIDCSQFVQLQN 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2662 983 MobiDBLite consensus disorder prediction 643 704 - -
Dere02g2662 983 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 734 894 IPR000608 -
Dere02g2662 983 MobiDBLite consensus disorder prediction 689 704 - -
Dere02g2662 983 Gene3D Ubiquitin Conjugating Enzyme 698 975 IPR016135 -
Dere02g2662 983 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 56 975 - -
Dere02g2662 983 MobiDBLite consensus disorder prediction 661 682 - -
Dere02g2662 983 SUPERFAMILY UBC-like 729 903 IPR016135 -
Dere02g2662 983 CDD UBCc 736 889 IPR000608 -
Dere02g2662 983 Pfam Ubiquitin-conjugating enzyme 739 885 IPR000608 -
Dere02g2662 983 SMART ubc_7 737 894 - -
Dere02g2662 983 FunFam Probable ubiquitin-conjugating enzyme E2 23 695 972 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2662 Dere-ChrDere02 29844126 29850418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2662 75 977 Miscellaneous Gene Families AT2G33770 51.492 0.0 916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2662 02 29844126 29850418 Dere02g2662 02 29844126 29850418 ECH