Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g2537 ATGGCGTCCAAGAACAGGGTGGTGTTCGAGGACTACTTCCCCGTGATGGTGGAGAAGTTGGGAACGGAGGGATTTATGAAGGAACTGAGAAATGGGTTTCAGATGCTGATGGACAGTGAGAAGGAGGTGATAACGTTCCAGAGCTTGAAGACCAACTCAGCCTTGCTGGGGTTGCAGGGCATGAGTGACGACGAGATAATGTGCATGCTCAGGGAAGGTGATCTGGATGGAGATGGAGCTCTAAATGAAATGGAGTTCTGCACCCTCATGTTCAGGTTGAGCCCTGATTTGATGAAGAACTCTAAGAATCTCTTGGAGGAAACCATTTTTGGTCAACTTTAG 342 0.4825 MASKNRVVFEDYFPVMVEKLGTEGFMKELRNGFQMLMDSEKEVITFQSLKTNSALLGLQGMSDDEIMCMLREGDLDGDGALNEMEFCTLMFRLSPDLMKNSKNLLEETIFGQL 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g2537 113 ProSiteProfiles EF-hand calcium-binding domain profile. 61 96 IPR002048 GO:0005509
Dere02g2537 113 Pfam EF-hand domain pair 40 92 IPR002048 GO:0005509
Dere02g2537 113 Gene3D - 7 112 - -
Dere02g2537 113 PANTHER CALCIUM-BINDING PROTEIN KIC 7 109 IPR044205 GO:0005509
Dere02g2537 113 SUPERFAMILY EF-hand 22 99 IPR011992 -
Dere02g2537 113 ProSitePatterns EF-hand calcium-binding domain. 74 86 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g2537 Dere-ChrDere02 27954033 27954374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g2537 9 109 EF-hand Containing Proteins AT4G27280 57.843 6.90e-38 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g2537 02 27954033 27954374 Dere02g2537 02 27954033 27954374 ECH