Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1432 ATGTCTAGCTCCACAAAAGTTTTGGATCCCGCATTCCAAGCAGTGGGTCAAAAAGTAGGAACTGAAATATGGAGGATTGAGAATTTCCAGCCAATTCCGTTGCCCAAATCTGAGTATGGGAAATTCTACATGGGAGATTCATACATTATTTTACAGATAACACAAGGCAAAGGAGGCACTTATTTTTATGACATACATTTCTGGATTGGAAAGGATACAAGTCAGGATGAGGCAGGGACAGCTGCCATCAAAACTGTTGAACTTGATGCAGCTCTTGGAGGACGTGCAGTGCAACACAGGGAAATCCAAGGCCATGAATCTGACAAATTTTTGTCATACTTTAAACCATGTATAATACCATTAGAGGGAGGTGTTGCAACTGGATTTAAAAAACCTGAAGAAGAAGTGTTCGAAACACGTTTGTACACATGCAAAGGAAAACGTGTTGTCAGAATGAAAGAGGTTCCTTTTGCACGGTCTTCACTGAATCATGATGATGTATTCATCCTTGACACTAAGAATAAGATTTATCAATTCAATGGGGCAAATTCAAATATTCAAGAAAGAGCCAAGGCTTTGGAAGTAATCCAGTTTCTAAAGGATAAATATCATGACGGGAAATGTGACATTGCAATTGTTGATGATGGCAAGTTGGACACAGAGTCAGATTCAGGTGAATTTTGGGTCCTATTTGGTGGTTTTGCTCCCATTGGAAAGAAGGTCATCAGTGAGGATGATATCGTTCCAGAGACCACTCCTGCTAAACTTTTCAGTATTACTGATGGTGAGGTCAAGCCAGTCGAAGGTGAACTGTCTAAGTCACTGTTGGAGAATAACAAATGCTATTTACTGGACTGTGGTGCTGAGGTATTTGTCTGGGTTGGCCGGGTAACACAAGTTGAAGAACGAAAAGCAGCATGCCAGGCAGCTGAGGAGTTTGTTGCAAGTCAAAATAGGCCAAAGTCTACACGGATAACCAGAATTATTCAAGGTTATGAGACACATGCATTCAAGTCCAACTTTGATTCTTGGCCATCAGGATCTGCTACCACTGGTGCTGAGGAAGGGAGAGGAAAAGTTGCAGCTTTGCTGAAGCAACAAGGTATGGGTGTTAAGGGAATGACAAAAACTACTCCAGTTAATGAGGAAATTCCACCTCTGCTTGAAGGAGGTGGAAAGATGGAGGTATGGCTGATCAATGGAAGTGCCAAGAACCCATTGCCTAAGGAGGATATTGGTAAATTTTACAGTGGAGATTGTTACATAGTATTGTACACTTACCACTCTGGTGAGAGGAAGGAAGACTACTTCTTGTGTTGTTGGTTTGGGAAAGACAGCATTGAGGAGGACCAAAGGATGGCTACTCGATTGGCCAACACAATGTCCAACTCACTAAAGGGTAGACCTGTTCAGGGCCGCATATTTGAAGGTAAAGAGCCACCACAATTTATTGCTCTTTTTCAGCCTATGGTGGTCCTTAAGGGAGGCCTGAGCTCTGGTTACAAAAAATTAATAGCAGAGAAGGGTTTGCCAGATGAAACGTACACAGCAGAAAGTATTGCACTTATTCGAATTTCTGGAACTTCTATTCATAATAATAAAGCAGTGCAAGTTGATGCAGTTGGAACCTCGTTAAATTCTACTGAGTGTTTCCTTCTGCAATCTGGCTCATCAGTTTTCACTTGGCATGGAAGTCAATGTTCTTTTGAACAGCAGCAGCTAGCAGCAAAAGTTGCTGAGTTTTTTAAGCCAGGAGTTACTTTAAAACATGCTAAAGAAGGAACAGAAAGCTCAGCTTTTTGGTTTGCACTTGGAGGAAAACAAAGCTTCACCAGCAAAAAAGCAACTAATGACATTGTTAGAGATCCACATTTGTTCACATTTTCATTAAACAAAGGAAAGTTTCAGGTAGAAGAGGTTTACAACTTTTCCCAAGATGATCTGTTGACAGAGGATATCCTCATACTTGACACACATGCTGAAGTATTTGTTTGGGTTGGTCAGTCTGTGGACTTGAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATATATAGATTTGGCTGCAGCTCTGGAGGGTCTCTCCCCACATGTACCACTGTATAAAGTTACAGAAGGGAACGAACCTTGCTTCTTCACAACATACTTTTCATGGGATCATGCAAAAGCTACTGTTCAAGGAAATTCATTCCAGAAGAAGGTGTCATTGCTCTTTGGGATTGGCCATGCTGTAGAGGAGAAGTCCAATGGATCAAGTCAAGGAGGACCAAGACAAAGAGCAGAAGCTTTGGCAGCCTTATCCTCTGCATTTAATTCATCTTCTGAGAAAACATCCAGTATGGATAGAGATAGACAGAACGGACTAAATCAAGGAGGTCCCAGACAAAGAGCGGAAGCTTTAGCTGCCTTGAATTCAGCATTTAATTCATCATCTGCAAGTAGAACAATTGCTCCCAGGTCTGCTGCAACAGGTCAAGGATCACAAAGAGCAGCAGCAGTAGCTGCTCTTTCAAACGTTCTCACTGCTGAAAAGAAGAAGCAATCGCCTGATGCCTCCCCTCCTGGGGCAATCAGTAGTCCTGTCGCCGAAAGTAGTGCTTCTGAAGCTAAAAGTGAAAGTGGCCATTCTGAAACAGAAGGTCCTGAAGAAGTTGCAGAAGCCAAGGAGACAGAAGAACTTGCGACTGAAACTGGTAGCAATGGGGATTTAGAACCAAAACAGGAAAATCTTGAGGATGGGAATGATAGTCAAAGTAGTCGGAGCACGTTCAGTTATGATCAATTAAAGACTAAATCTGATAATCCTGTCTCTGGAATTGATTTTAAACGAAGAGAGGCCTATCTATCAGATGAAGACTTCAAAACTGTATTTGGAATAACAAAAGAAGCATTCTATAAATTGCCAAAATGGAAGCAGGACATGCAGAAGAAGAAAGCTGATTTGTTTTAG 2952 0.4157 MSSSTKVLDPAFQAVGQKVGTEIWRIENFQPIPLPKSEYGKFYMGDSYIILQITQGKGGTYFYDIHFWIGKDTSQDEAGTAAIKTVELDAALGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVATGFKKPEEEVFETRLYTCKGKRVVRMKEVPFARSSLNHDDVFILDTKNKIYQFNGANSNIQERAKALEVIQFLKDKYHDGKCDIAIVDDGKLDTESDSGEFWVLFGGFAPIGKKVISEDDIVPETTPAKLFSITDGEVKPVEGELSKSLLENNKCYLLDCGAEVFVWVGRVTQVEERKAACQAAEEFVASQNRPKSTRITRIIQGYETHAFKSNFDSWPSGSATTGAEEGRGKVAALLKQQGMGVKGMTKTTPVNEEIPPLLEGGGKMEVWLINGSAKNPLPKEDIGKFYSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQRMATRLANTMSNSLKGRPVQGRIFEGKEPPQFIALFQPMVVLKGGLSSGYKKLIAEKGLPDETYTAESIALIRISGTSIHNNKAVQVDAVGTSLNSTECFLLQSGSSVFTWHGSQCSFEQQQLAAKVAEFFKPGVTLKHAKEGTESSAFWFALGGKQSFTSKKATNDIVRDPHLFTFSLNKGKFQVEEVYNFSQDDLLTEDILILDTHAEVFVWVGQSVDLKEKQNAFEIGQKYIDLAAALEGLSPHVPLYKVTEGNEPCFFTTYFSWDHAKATVQGNSFQKKVSLLFGIGHAVEEKSNGSSQGGPRQRAEALAALSSAFNSSSEKTSSMDRDRQNGLNQGGPRQRAEALAALNSAFNSSSASRTIAPRSAATGQGSQRAAAVAALSNVLTAEKKKQSPDASPPGAISSPVAESSASEAKSESGHSETEGPEEVAEAKETEELATETGSNGDLEPKQENLEDGNDSQSSRSTFSYDQLKTKSDNPVSGIDFKRREAYLSDEDFKTVFGITKEAFYKLPKWKQDMQKKKADLF 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1432 983 Gene3D Severin 133 245 IPR029006 -
Dere02g1432 983 PANTHER VILLIN 3 973 IPR007122 GO:0051015
Dere02g1432 983 CDD gelsolin_S2_like 138 232 - -
Dere02g1432 983 SUPERFAMILY Actin depolymerizing proteins 129 237 - -
Dere02g1432 983 Gene3D Villin headpiece domain 907 983 IPR036886 GO:0003779|GO:0007010
Dere02g1432 983 Gene3D Severin 388 523 IPR029006 -
Dere02g1432 983 MobiDBLite consensus disorder prediction 871 896 - -
Dere02g1432 983 Pfam Villin headpiece domain 948 983 IPR003128 GO:0003779|GO:0007010
Dere02g1432 983 FunFam Gelsolin 6 131 - -
Dere02g1432 983 CDD gelsolin_S3_like 254 343 - -
Dere02g1432 983 CDD gelsolin_S1_like 12 124 - -
Dere02g1432 983 FunFam Villin-like 1 132 247 - -
Dere02g1432 983 CDD gelsolin_S6_like 622 720 - -
Dere02g1432 983 SMART VILL_6 518 607 IPR007122 GO:0051015
Dere02g1432 983 SMART VILL_6 392 490 IPR007122 GO:0051015
Dere02g1432 983 SMART VILL_6 252 344 IPR007122 GO:0051015
Dere02g1432 983 SMART VILL_6 624 719 IPR007122 GO:0051015
Dere02g1432 983 SMART VILL_6 19 117 IPR007122 GO:0051015
Dere02g1432 983 SMART VILL_6 137 234 IPR007122 GO:0051015
Dere02g1432 983 MobiDBLite consensus disorder prediction 853 870 - -
Dere02g1432 983 Gene3D Severin 614 735 IPR029006 -
Dere02g1432 983 MobiDBLite consensus disorder prediction 772 796 - -
Dere02g1432 983 FunFam Villin-4 385 520 - -
Dere02g1432 983 SUPERFAMILY Actin depolymerizing proteins 596 718 - -
Dere02g1432 983 FunFam Gelsolin 521 613 - -
Dere02g1432 983 SMART VHP_1 948 983 IPR003128 GO:0003779|GO:0007010
Dere02g1432 983 Gene3D Severin 246 356 IPR029006 -
Dere02g1432 983 FunFam Villin-4 248 354 - -
Dere02g1432 983 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
Dere02g1432 983 MobiDBLite consensus disorder prediction 809 828 - -
Dere02g1432 983 SUPERFAMILY Actin depolymerizing proteins 223 345 - -
Dere02g1432 983 Gene3D Severin 5 132 IPR029006 -
Dere02g1432 983 ProSiteProfiles Headpiece (HP) domain profile. 918 983 IPR003128 GO:0003779|GO:0007010
Dere02g1432 983 MobiDBLite consensus disorder prediction 915 935 - -
Dere02g1432 983 Pfam Gelsolin repeat 635 713 IPR007123 -
Dere02g1432 983 Pfam Gelsolin repeat 533 583 IPR007123 -
Dere02g1432 983 Pfam Gelsolin repeat 264 337 IPR007123 -
Dere02g1432 983 Pfam Gelsolin repeat 405 484 IPR007123 -
Dere02g1432 983 Pfam Gelsolin repeat 33 111 IPR007123 -
Dere02g1432 983 Pfam Gelsolin repeat 149 217 IPR007123 -
Dere02g1432 983 CDD gelsolin_S5_like 519 609 - -
Dere02g1432 983 SUPERFAMILY Actin depolymerizing proteins 510 611 - -
Dere02g1432 983 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Dere02g1432 983 CDD gelsolin_S4_like 386 487 - -
Dere02g1432 983 MobiDBLite consensus disorder prediction 845 938 - -
Dere02g1432 983 FunFam Villin-like 1 614 735 - -
Dere02g1432 983 Gene3D Severin 524 612 IPR029006 -
Dere02g1432 983 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Dere02g1432 983 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Dere02g1432 983 SUPERFAMILY VHP, Villin headpiece domain 918 983 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1432 Dere-ChrDere02 13847086 13857552 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2433 01 38864803 38865606 Dere02g1432 02 13847086 13857552 CCT
Dere02g1432 02 13847086 13857552 Dere02g1432 02 13847086 13857552 ECH