Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1122 ATGGGGGCTGAAACAGTAACTGGGTCATGGTTCAGTGCTTTGTGGCCAGTCTCCCGCAAGTCTGCATCAGATGACAAGGAAGTAATTGGAATTTTGGCATCAGAAGTGTCTAACTTGATGTTGAAGGTAATTAGTTTATGGCATTCTCTGAGTAACAATGAGGTAATGAGTTTGAGGGAGCACTTAGTAAACTCAATTGGGGTCAAAATGCTGGTTTCTGGCGATAGAAGTTTCTTGATGGAACTTGCATTGAATGAGATACTCTGTGACTTCCACTGCATAGCCAGGTCCGTGGCCAGGTTGGGTAAGAGGTGCGAGGATCCAGTTTATCATCATTATGAACAATTTGTAAATAACCCAGTTCAGAATTGCTTTCGGTGGTCTGGGTGGGAATATCGATGGAAAAAGATGGAAAGGAAGGTGAAGAAAATGGAAAGATTTGCTGCTTTTATGACACATTTGTCTCAAGAGCTTAAAGTACTGGAAGAGCATGAAAAAAATTTCAGGAAAATGCGGGCCAACCCTGAAATGAGTCAGGTCAGATCGCTCAAGTTTAAGAAAGAGGTTATGTTGCAACGCCAAGTGGTAAAAACTCTGAGAGACATGTCTCCGTGGAATAGAAGTTATGATTATATTGTCCGGTTGTTGGTAAGATCACTATTTACAATTCTAGAAAGGATCATGCATGTCTTTGGGAATAATCACCAACAGCTAACTGAGCAGCAACAAAATGACTCTGAATGTGTGCATATTAATCATCTTCCAGGCAGTTGTTCCATCCCTACTTCTATGCGTTCTTATATTCATCAATCACTGAATGATCCTAATGGATTGTATTCAGAACATCTTGGGAGGAGGCAGATGCCACACTCAGGCTATGTGACTGACAAGAGCAAAAGAAAAAAGACATGGCAGCAAGATTTTCGTTCAGAAAGCAAGCACTTAGGACATATCGGTCTATTCAAAGGATGCGCGTCAGTAGGAACTGAATCCCCTATTGTACAAAGCTATGTGGCAACAACTGGTGGTTCTATGAGGATAAACGATTGTCACATGAAAAAGGTTGACAAATCCAAAACTGCAGATAATTTATGTTTCTTTAACAGGATGAGAATATATTCCAAATTAACCTTCAGTGATCGGTTAAAACCAGCACCATTCACTCTTGGTGCTGCTGCTATGGCTTTCCACTATGCCAATGTGATTATATTGATCGAGAAGATGGCTTCATCACCTCACATGATTGATAACGAAACCAGGGATTATTTGTACAGCATGTTACCAACAACAATAAGGGCTGCTCTGAGGGCTAAGCTCAGACGGTGCGCCAAAAGTAAGGCTTCCTTGGCCTATGATGTTACAGCAGGATGGAGTATGATGGTGACGCAGATTTTAGAATGGTTGGCTCCACTAGCTCATAGCATGAAAATGTGGCATTCTGAGAGGAATTTTAAAAAGGAGGATATAACTTCAAAGGCAAATATCCTACTCGTCCAGACTCTCTACTTCGCAAACCATGCAAAAGTTGAAGATGTGATTATAGAACTTCTTGTTGGTCTCAACTACATATGCAGGATTAGAAGCTGA 1587 0.4108 MGAETVTGSWFSALWPVSRKSASDDKEVIGILASEVSNLMLKVISLWHSLSNNEVMSLREHLVNSIGVKMLVSGDRSFLMELALNEILCDFHCIARSVARLGKRCEDPVYHHYEQFVNNPVQNCFRWSGWEYRWKKMERKVKKMERFAAFMTHLSQELKVLEEHEKNFRKMRANPEMSQVRSLKFKKEVMLQRQVVKTLRDMSPWNRSYDYIVRLLVRSLFTILERIMHVFGNNHQQLTEQQQNDSECVHINHLPGSCSIPTSMRSYIHQSLNDPNGLYSEHLGRRQMPHSGYVTDKSKRKKTWQQDFRSESKHLGHIGLFKGCASVGTESPIVQSYVATTGGSMRINDCHMKKVDKSKTADNLCFFNRMRIYSKLTFSDRLKPAPFTLGAAAMAFHYANVIILIEKMASSPHMIDNETRDYLYSMLPTTIRAALRAKLRRCAKSKASLAYDVTAGWSMMVTQILEWLAPLAHSMKMWHSERNFKKEDITSKANILLVQTLYFANHAKVEDVIIELLVGLNYICRIRS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1122 528 Pfam Protein of unknown function (DUF668) 388 475 IPR007700 GO:0045927
Dere02g1122 528 Coils Coil 154 174 - -
Dere02g1122 528 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Dere02g1122 528 PANTHER BNAC09G50660D PROTEIN 20 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1122 Dere-ChrDere02 10717470 10719056 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2757 01 42441944 42444247 Dere02g1122 02 10717470 10719056 CCT
Dere02g1122 02 10717470 10719056 Dere02g1122 02 10717470 10719056 ECH