Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0919 ATGAGAACAGAGTCGAGGAAGATATCCAAGTCTTCGTGGCCGAAATTATCCATGAGGAAGTGGCTCCGTATAAAGAGTGTCCCCGGGAAATTTCACTCAGACTTCAATGAAATAGGTGCTCAGAGGGAGCGAAGAAATAGCTGCTCAGATCTAAAAGACTGTTACGTCGTCGTACCGGATGATTTCTCAGAGGGGTGGTTGATGGAAGCCAATATCGGAAGGAAACAATATACCGTACAGGAGAAGGAAGCACCACCTGTCAGCGATATACTCAATCTTAGAATGTTCGTGGGGACGTGGAACGTGGGAGGAAAGTCCCCTAACGAAGGCTTGAACTTGAGAGACTCGCTTAATTCTCCTTCGCCTGCTGACATCTATGTTCTTGGGTTTCAGGAAATTGTCCCTCTCAATGCAGGGAACGTGCTTGGGCCAGAGGACAGTGGCCCGGCGGCAAAGTGGCTATCCCTTATCGGTCAAGCCTTGAACTCCGACGAGCTTGACTCCGATATGAAGCCAAGGTCCAGTTTCTCTGACTTCCTCTGTTTCGAGGACGACTTTGAGCAACCTCGCTATTGCCTGGCAACAAGCAAGCAGATGGTCGGTATCTTCTTGTGCGTGTGGGTGCGAGCCGATCTTTACAAACATGTTACCAACTTGAAGGTGTCCTGCGTTGGCAGAGGCATCATGGGCTATCTGGGAAACAAGGGTTCGATTTCAATTAGTATGACATTGTACCACACCACCTTCTGTTTTGTTTGTACCCACTTAACCTCCGGAGAGAAAGATGGCGATGAGGTGCGAAGAAACTTGGACGTCTCCGAAATCTTGAAGAAAACTAAATTTTCTCACTCGTTTAAGGCTCTTGGTCAACCCCTCTCTCCTGAAAGCATAATGGATCATGATAAGATAATTTGGCTTGGGGATTTGAATTATCGGCTAGCCTCTGGTTGTGACGATACACATGAATTACTAAAGAAGAATGATTGGCAGGCACTACTGGAGAAGGATCAGCTAAGAATAGAGCAGAGAGCTGGCCGAGTATTTCAAGGTTGGAAGGAAGGGAAAATATTTTTTGCTCCTACTTACAAATACTTAGCTAATTCTGACCACTATGTTGTCCGAACATCCAAGTCCAAGGAAAAACAACGAACTCCTGCTTGGTGTGACCGGATTCTGTGGAAAGGTGAAGGGCTAAAGCAGATGTGGTACGTGAGAGGAGAATCCAGATTCTCAGACCACAGGCCTGTCTACTCACTATTCTCAGTTCAAGTGGACATGACAACCAAGAATCTCAGTACTCCCAAACCCAATAATAATAATGCTCCCACTACAGCTATCACTAAAACAGTGACAAACGCTGCTTTGTCATCGAACTGCGCGGCTAAAGTTCAGGTAGAGGAGCAGCTCTTGTTACTAACCAGGGTACAAAGTTGCATAGACAGCGCACCCAGAGTAACCGACCAGAAACCACCAGACATACCTGAGCTGAAAAGGAGACCAGACATACCTGAGCTGAAAATATTAGAGGAAACGGCATTTTCAGCCATTAGTTTTTAA 1557 0.4631 MRTESRKISKSSWPKLSMRKWLRIKSVPGKFHSDFNEIGAQRERRNSCSDLKDCYVVVPDDFSEGWLMEANIGRKQYTVQEKEAPPVSDILNLRMFVGTWNVGGKSPNEGLNLRDSLNSPSPADIYVLGFQEIVPLNAGNVLGPEDSGPAAKWLSLIGQALNSDELDSDMKPRSSFSDFLCFEDDFEQPRYCLATSKQMVGIFLCVWVRADLYKHVTNLKVSCVGRGIMGYLGNKGSISISMTLYHTTFCFVCTHLTSGEKDGDEVRRNLDVSEILKKTKFSHSFKALGQPLSPESIMDHDKIIWLGDLNYRLASGCDDTHELLKKNDWQALLEKDQLRIEQRAGRVFQGWKEGKIFFAPTYKYLANSDHYVVRTSKSKEKQRTPAWCDRILWKGEGLKQMWYVRGESRFSDHRPVYSLFSVQVDMTTKNLSTPKPNNNNAPTTAITKTVTNAALSSNCAAKVQVEEQLLLLTRVQSCIDSAPRVTDQKPPDIPELKRRPDIPELKILEETAFSAISF 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0919 518 Pfam Endonuclease/Exonuclease/phosphatase family 98 413 IPR005135 GO:0003824
Dere02g0919 518 SUPERFAMILY DNase I-like 89 426 IPR036691 -
Dere02g0919 518 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 439 IPR045849 GO:0004445
Dere02g0919 518 SMART i5p_5 91 428 IPR000300 GO:0016791|GO:0046856
Dere02g0919 518 Gene3D Endonuclease/exonuclease/phosphatase 74 444 IPR036691 -
Dere02g0919 518 FunFam Type I inositol polyphosphate 5-phosphatase 8 74 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0919 Dere-ChrDere02 8771267 8776031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g0919 88 424 Acyl Lipid Metabolism Gene Families AT1G65580 30.711 6.76e-40 152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2982 01 44385172 44387359 Dere02g0919 02 8771267 8776031 CCT
Dere02g0919 02 8771267 8776031 Dere02g0919 02 8771267 8776031 ECH