Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0401 ATGTTGACGTTATATCACAGTGAGAATAATGGAATATTTTACCCAACGAATAATCATCTTTTTCCTTCACAACGAATATGTTGTGGTACTATACTTGCACTAGAGAAATTTTTCGAATTGATCAGAGGATCCAAGGTTGTGCGAGCCAGAGTCATTGGTCGTGCAATAGTGGTGAGGAATTACACTCAAAACACTCGCACTCCAGATTATACATTCTTCGATATGGAAACTGCTCGCAGGACCACTGGAGTCAATTACGATTGCTTGCTTTTCGATATGGATGACACACTCTACCCATCGAGCTCAGGTCTCAATCTGGCATGTCGAAAGAATATACAAGAGTATATGTTGGAACGCTTGCATATTGAAGAGAGTGAAGTGCCAAAGATGTGCCTGGATCTGTATATCGAATATGGGACAACTATGGCAGGACTAAAGGCCCTAGGTTATGAGTTTGACAATGATGATTTTCATGCTTACGTGCATGGAAGACTACCGTATTACATATTGAAGCCTGATCCAGAGTTGAGGAACCTTCTGCTTACCATCCCTCAGCGTAAAATAATTTTCACCAATGCAGATCAAGCGCATGCAATTGAAGTTCTCAAAAGGTTGGGCTTGGAAGATTGTTTTGAGGGTATCATATGCTTTGAAACACTCAATCCTCCTTCCCACATTGGGAATGGATGTATCAGCTCCAAGTCACAGATCCTCTGCAAGCCCTCCTTGGAAGCCATTGAAGCTGCTATTCGGATTGCCAAAGTGGATCCAAAGAAAACGATTTTCTTTGACGACAGTGTCAGAAATATTGCAAGCGGAAAAGCGGCTGGGCTTCACACAGTTATTGTGGGACGTTCAGATTTGTTGCCTGGTGCAGATCATGCCCTGAATAGCATCCATAATATGAAAGAAGCACTACCCCAAATATGGGAAGTAGAAGAGGGCGATCAACAGCACTTGATCCGACCCACAGCAGTTCAAACCATGGTCCTTGCATAG 999 0.4294 MLTLYHSENNGIFYPTNNHLFPSQRICCGTILALEKFFELIRGSKVVRARVIGRAIVVRNYTQNTRTPDYTFFDMETARRTTGVNYDCLLFDMDDTLYPSSSGLNLACRKNIQEYMLERLHIEESEVPKMCLDLYIEYGTTMAGLKALGYEFDNDDFHAYVHGRLPYYILKPDPELRNLLLTIPQRKIIFTNADQAHAIEVLKRLGLEDCFEGIICFETLNPPSHIGNGCISSKSQILCKPSLEAIEAAIRIAKVDPKKTIFFDDSVRNIASGKAAGLHTVIVGRSDLLPGADHALNSIHNMKEALPQIWEVEEGDQQHLIRPTAVQTMVLA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0401 332 Gene3D - 150 310 IPR023214 -
Dere02g0401 332 NCBIfam pyrimidine 5'-nucleotidase 87 283 IPR010237 -
Dere02g0401 332 SUPERFAMILY HAD-like 85 308 IPR036412 -
Dere02g0401 332 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 83 329 - -
Dere02g0401 332 Coils Coil 330 332 - -
Dere02g0401 332 NCBIfam HAD-IA family hydrolase 238 283 IPR006439 -
Dere02g0401 332 Pfam Haloacid dehalogenase-like hydrolase 89 283 IPR041492 -
Dere02g0401 332 CDD HAD_5NT 88 285 IPR010237 -
Dere02g0401 332 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 84 312 - -
Dere02g0401 332 SFLD C1.5.3: 5'-Nucleotidase Like 84 312 IPR010237 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0401 Dere-ChrDere02 4043129 4046001 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3584 01 50201761 50204996 Dere02g0401 02 4043129 4046001 CCT
Dere02g0401 02 4043129 4046001 Dere02g0401 02 4043129 4046001 ECH