Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g0013 ATGTGGCAGATTGCAGAGACAGATGATGATCCAATTCAGATTAATATAGCACAATATCCTTCAATTGCTTGTTCATGGTGTCATCTCGACCTTGGGCCTCAATCGTCATTTCTGGTTCGCCTTGGGTTGCTCCTTCTTCATCTGTTATCCTCTGTATCCTCTCGTCTGTTGTCCTCCATCTTAAATAAAGAGATGGGGCTGTCTTTCACCAAACTTTTTAGTCGCCTCTTTGTCAAGAAAGAGATGCGTATTCTCATGGTAGGTCTTGATGCTGCTGGTAAGACTACCATCTTGTACAAGCTCAAACTGGGAGAGATCGTGACAACCATACCTACAATCGGATTTAATGTGGAGACTGTGGAATACAAAAATATTAGCTTCACGGTCTGGGATGTAGGAGGCCAAGACAAGATTCGTCCTTTATGGAGACACTACTTCCAAAACACACAGGGGCTTATCTTTGTGGTTGATAGCAATGATCGTGATCGTGTTGTTGAGGCTAGAGATGAGCTCCACCGGATGTTAAATGAGGATGAGTTGAGAGATGCGGTGCTGCTTGTATTTGCCAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCAGAAATTACGGACAAGCTTGGTCTTCATTCTCTTCGTCAACGCCACTGGTATATCCAAAGCACGTGTGCCACTTCTGGGGAAGGACTCTACGAGGGACTGGACTGGCTTTCCAACAATATAGCCAACAAGGCTTGA 738 0.4458 MWQIAETDDDPIQINIAQYPSIACSWCHLDLGPQSSFLVRLGLLLLHLLSSVSSRLLSSILNKEMGLSFTKLFSRLFVKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g0013 245 PRINTS GTP-binding SAR1 protein signature 111 135 IPR006689 GO:0003924|GO:0005525
Dere02g0013 245 PRINTS GTP-binding SAR1 protein signature 83 106 IPR006689 GO:0003924|GO:0005525
Dere02g0013 245 PRINTS GTP-binding SAR1 protein signature 183 204 IPR006689 GO:0003924|GO:0005525
Dere02g0013 245 PRINTS GTP-binding SAR1 protein signature 138 163 IPR006689 GO:0003924|GO:0005525
Dere02g0013 245 NCBIfam small GTP-binding protein domain 80 220 IPR005225 GO:0005525
Dere02g0013 245 PANTHER ADP RIBOSYLATION FACTOR-RELATED 71 240 IPR024156 GO:0005525
Dere02g0013 245 SMART arf_sub_2 65 245 - -
Dere02g0013 245 SMART sar_sub_1 65 241 IPR006689 GO:0003924|GO:0005525
Dere02g0013 245 FunFam ADP-ribosylation factor 1 65 245 - -
Dere02g0013 245 SMART rab_sub_5 82 244 - -
Dere02g0013 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 243 IPR027417 -
Dere02g0013 245 Gene3D - 68 245 IPR027417 -
Dere02g0013 245 ProSiteProfiles small GTPase Arf family profile. 75 241 - -
Dere02g0013 245 CDD Arf1_5_like 82 240 IPR045872 GO:0003924
Dere02g0013 245 Pfam ADP-ribosylation factor family 69 241 IPR006689 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g0013 Dere-ChrDere02 125458 129636 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g0013 02 125458 129636 Dere02g0013 02 125458 129636 ECH