Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3699 ATGTCGAGCTTGAGCATCTGGTTGGCTCTGGGAGCATTAGCTCTGGTATTTGTCTCATCGGTTTCAGCGGACGACGTCGTCGTGCTGACGGAGGCGAACTTCGATAAAGAGGTTGGCCAAGATCGCGGCGCTCTCGTCGAGTTCTACGCTCCCTGGTGTGGACACTGTAAAAAGCTTGCACCAGAGTATGAAAAACTTGGAACGAGTTTTAAAAAGGCCAAATCCATTTTGATTGGGAAGGTGGACTGTGATGATCAAAAAAGCCTTTGCAGCAAATATGGTGTTTCTGGTTATCCCACAATTCAGTGGTTTCCTAAGGGATCTCTGGAACCAAAGAAGTATGAAGGTGCACGTACTGCAGAAGCCCTTGCTGAGTATGTGAACAAAGAAGGAGGCACCAACGTGAAGATAGCTTCTGTTCCATCCAGTGTTGTAGTTCTCACTCCTGAAAGCTTTGATCAAGTTGTCTTGGATGAAACAAAGGACGTTCTGGTTGAGTTCTATGCACCATGGTGTGGTCATTGCAAAGCCCTTGCTCCCACTTATGAAAAGGTTGCTGCAGCATTCAAACTGGAGGAAGATGTTGTAATAGCAAATATTGACGCTGATCAATACAAAGATTATGCTGAGAAGTATGGTGTTAGTGGCTATCCCACTCTTAAATTTTTCCCTAGGAGCAACAAAGCTGGTGAAGATTATGATGGTGGCCGAGATTTGGAAGATTTTGTGGCTTTTATCAATGAGAAATGTGGTACCAGCCGTGATGGGAAAGGACAACTTACTTCTAAAGCTGGTATAGTACCAGATGTGGATGGCTTGGTGAAGGAATTTGTGAGTGCTTCTAATGATGAAAAGAAAGAGGTCTATTCCCGGCTTGAGGAGGAAGTTAAGAAACTTAAGGGTTCTGCCACAAGATATGGCAATATCTACTTAAAAGCTGCTAAAAATAGCATGGAAAAAGGAGCAGATTATGCATCAAAGGAGATTCAACGTCTTGAGCGCATACTTGACAAGTCAGTCAGCCCTGCCAAGGCAGATGAGCTCACTCTCAAGAAGAACGTCTTGTCTACCTTTGTTGCTTGA 1083 0.4432 MSSLSIWLALGALALVFVSSVSADDVVVLTEANFDKEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGTSFKKAKSILIGKVDCDDQKSLCSKYGVSGYPTIQWFPKGSLEPKKYEGARTAEALAEYVNKEGGTNVKIASVPSSVVVLTPESFDQVVLDETKDVLVEFYAPWCGHCKALAPTYEKVAAAFKLEEDVVIANIDADQYKDYAEKYGVSGYPTLKFFPRSNKAGEDYDGGRDLEDFVAFINEKCGTSRDGKGQLTSKAGIVPDVDGLVKEFVSASNDEKKEVYSRLEEEVKKLKGSATRYGNIYLKAAKNSMEKGADYASKEIQRLERILDKSVSPAKADELTLKKNVLSTFVA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3699 360 SUPERFAMILY ERP29 C domain-like 264 359 IPR036356 -
Dere01g3699 360 Coils Coil 282 302 - -
Dere01g3699 360 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 22 346 - -
Dere01g3699 360 CDD PDI_a_ERp38 25 127 - -
Dere01g3699 360 SUPERFAMILY Thioredoxin-like 24 132 IPR036249 -
Dere01g3699 360 FunFam Protein disulfide-isomerase A6 homolog 138 256 - -
Dere01g3699 360 CDD ERp29c 267 358 IPR011679 GO:0005783
Dere01g3699 360 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Dere01g3699 360 FunFam Protein disulfide-isomerase A6 homolog 19 137 - -
Dere01g3699 360 Gene3D - 264 360 IPR036356 -
Dere01g3699 360 SUPERFAMILY Thioredoxin-like 141 251 IPR036249 -
Dere01g3699 360 ProSiteProfiles Thioredoxin domain profile. 136 251 IPR013766 -
Dere01g3699 360 ProSitePatterns Thioredoxin family active site. 164 182 IPR017937 -
Dere01g3699 360 Gene3D Glutaredoxin 19 136 - -
Dere01g3699 360 Gene3D Glutaredoxin 137 263 - -
Dere01g3699 360 NCBIfam protein disulfide-isomerase domain 147 249 IPR005788 GO:0003756
Dere01g3699 360 NCBIfam protein disulfide-isomerase domain 29 130 IPR005788 GO:0003756
Dere01g3699 360 Pfam Thioredoxin 26 128 IPR013766 -
Dere01g3699 360 Pfam Thioredoxin 144 247 IPR013766 -
Dere01g3699 360 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 265 358 IPR011679 GO:0005783
Dere01g3699 360 CDD PDI_a_ERp38 143 246 - -
Dere01g3699 360 PRINTS Thioredoxin family signature 213 224 - -
Dere01g3699 360 PRINTS Thioredoxin family signature 171 180 - -
Dere01g3699 360 PRINTS Thioredoxin family signature 163 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3699 Dere-ChrDere01 51298424 51302508 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3699 01 51298424 51302508 Dere01g3699 01 51298424 51302508 ECH