Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3676 ATGGGGTCTCTGGGAGCTGAAACTGCAAAGAAAGCAATGTGGCTATATCCAAAAGTATTGGGTTTTAAACCTTCTGAAAGATGGGGGCACTCTGCTTGCTACTCCGAGGGCCTTATGTATGTCTTTGGGGGGTGTTGTGGGGGTCTTCATTTTAGCGATGTTCTGACTTTGGACCTTGACAAAATGACATGGAGCAAACTTGCGACCACAGGGGAAGGGCCTGGACCTAGAGATAGCCAAAGTGCTGTTGTTGTAGGCCGTAAAATGATAGTGTTTGGTGGTACAAATGGATTCAAGAAGGTTAATGATATTCATATTCTAGATCTCGCGACCAAAGAATGGATTCGCCCTCAATGTAAAGGAAAGCCTCCTTCTCCACGCGAAAGTCACACTGCCACTCTCATTGGTGAAGAAAGATTAGTGATTTTTGGTGGTAGTGGAGAAGGTGATGCAAACTACCTAAACGATTTGCATATCCTAGATCTTCGAACCATGAGATGGACTTCTCCGGAGGTGAAAGGTGACTTGCCTGTCCCTAGGGATAGTCACACTACTCTTGCAATTGGGAACAAGCTTTTTGTTTATGGTGGAGACTGTGGTGATCAGTACCAGGGTAATGTCAATATGCTTGATCTGGATACAATGACTTGGTCGAGATTGACAGTTCAAGGATCTTCACCTGGCGTAAGAGCAGGGCATACAGCTGTAAACATAGGAACAAAGTTCTATATTATTGGAGGGGTTGGAGATAAACGTTACTATAATGACGTTTGGGTGTTTGATGTCTGCACATGTTCGTGGACTCAACTTGAAATACGAGGTCCGCAACCACAAGGGCGGTTTTCTCATACAGCTGCTGTCGCTGACATGGACATTGTCATATATGGAGGGTGTGGGGAAGATGAACGTCCTCTCCAAGAATTGTTAGTATTGCAGCTGGGAGCCGAGCACCCAAATGGACGTTACAATATTTCAATGTGCAAGGTGTTTGGAAGCTATTGGAACCAAGAAAAGAAGACTTTCCCAAGTGGAGCTGAAAGCAACTTGAAAACTATGCTCATGGGGAATAATGCGGAAGCTATAGGAAAGGGAGCTTATGAATTGGTATCAGAAAAAAGGCAACCTTTCCACTTTGACTCTGATGCTTCACAACAGAAGAAGAGGAGAATTGCTGCTTCAAAGGTGTGGGATGTTGAATCAGAACAGGAAGAGCATTCCCTTTCATTGTCCCAGCATTCATCTCCGACTCAATCTGATCAAGAACCGAACCCTGCTCAAAATGCCAATGCTTCAATTGCGAACTCTCAGCGATTCCTTCTGTTCAAGCAGTTTAATCAAATGCCAATCAATTGCCAACATGACAATGCTTCAATTAACCAGAAAATATTAAAGAATTCTAACCATGGAGGTCCTCAGGGTCTTCATTTTAAAGAACATCAGAAACGAAAGCAAGAACAGTATCTTCATGTTTACGACGCAGAGCACAAGCCCAAGGGTGGAGGACCCATCCAACACCTGATTGGTGCTGAAGTCCGAGGGAAAGTTGATGGGGCCTTTGACTCAGGTTTGCTGATGACTGCGACTGTGAATGGAAAATTTTTCCGAGGAGTCTTATTTGCACCCGGAGCAGGAATAGGGTCAAGAGGGGCCAGTGTTGAACCGAGTTGTTGCTTGTATGGTTCATGTGGCTCCAACCAACCGTTGATGAACTCAAATCATAACGTGGAGAAATTGAGGGGGGGTCAGAAGGTAACTAGTTGTTCCCGTGCAGAGTCGTGTCAGGTGGCTCAACCATTTCCAATCATGAGAGCCACTCCTGCATCTTTATCCGAAGAGCAGAAAGTGAGGAGCGATCTTAATGAGTTGGCTTTGACGCTCGGAGGACCTGCTAGTGGTCACCACCAAAGCTGA 1911 0.4526 MGSLGAETAKKAMWLYPKVLGFKPSERWGHSACYSEGLMYVFGGCCGGLHFSDVLTLDLDKMTWSKLATTGEGPGPRDSQSAVVVGRKMIVFGGTNGFKKVNDIHILDLATKEWIRPQCKGKPPSPRESHTATLIGEERLVIFGGSGEGDANYLNDLHILDLRTMRWTSPEVKGDLPVPRDSHTTLAIGNKLFVYGGDCGDQYQGNVNMLDLDTMTWSRLTVQGSSPGVRAGHTAVNIGTKFYIIGGVGDKRYYNDVWVFDVCTCSWTQLEIRGPQPQGRFSHTAAVADMDIVIYGGCGEDERPLQELLVLQLGAEHPNGRYNISMCKVFGSYWNQEKKTFPSGAESNLKTMLMGNNAEAIGKGAYELVSEKRQPFHFDSDASQQKKRRIAASKVWDVESEQEEHSLSLSQHSSPTQSDQEPNPAQNANASIANSQRFLLFKQFNQMPINCQHDNASINQKILKNSNHGGPQGLHFKEHQKRKQEQYLHVYDAEHKPKGGGPIQHLIGAEVRGKVDGAFDSGLLMTATVNGKFFRGVLFAPGAGIGSRGASVEPSCCLYGSCGSNQPLMNSNHNVEKLRGGQKVTSCSRAESCQVAQPFPIMRATPASLSEEQKVRSDLNELALTLGGPASGHHQS 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3676 636 Pfam Galactose oxidase, central domain 138 188 - -
Dere01g3676 636 Pfam Galactose oxidase, central domain 86 135 - -
Dere01g3676 636 Pfam Galactose oxidase, central domain 38 84 - -
Dere01g3676 636 Pfam Galactose oxidase, central domain 230 277 - -
Dere01g3676 636 Gene3D - 170 351 IPR015915 GO:0005515
Dere01g3676 636 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 13 572 - -
Dere01g3676 636 MobiDBLite consensus disorder prediction 407 427 - -
Dere01g3676 636 SUPERFAMILY Kelch motif 19 220 IPR015915 GO:0005515
Dere01g3676 636 MobiDBLite consensus disorder prediction 393 427 - -
Dere01g3676 636 Gene3D - 13 169 IPR015915 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3676 14 323 Acyl Lipid Metabolism Gene Families AT3G05420 31.677 3.04e-38 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3676 01 51001995 51005272 Dere01g3676 01 51001995 51005272 ECH