Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3672 ATGGCCTCCAAAGCTGTTCATTCCTCTCTGTCGCGCCCCGCGACGTCCTTCTTATTATCTCCCAATCTAAGAGGACTGAAACCTATTTCACTCCCGCTCCATTCCTTCCATTACCGGTCGAAACGCCTCGTTTTGTCCCGAAGATTGGTGCTGAGAGCTTGCGTGAAGGTGGAAGAGAAGGATGTTGCGGAAAATTCATCTGCAAGAGAATGGGGGAAGGTTTCTGCAGTGTTGTTTGACATGGACGGTGTCCTCTGCAACAGTGAGGATCTTTCTAGAAGAGCGGCCGTTGATGTCTTCGCGGAGTTGGGCGTCCAAGTCACTGTCGAGGATTTTGTGCCATTCATGGGAACTGGTGAAGCAAACTTTTTGGGAGGTGTTGCCACTGTTAAGGGAGTTAAAGGATTTGACCCCAAAGCTGTAAAACAGAGGTTCTTTGAAATTTATTTAGATAAGTATGCAAAACCAGAGTCTGGAATTGGATTCCCAGGTGCACTTGAACTAATTTCTCAGTGCAAAAGCAAAGGCCTTAAAGTTGCTGTTGCATCTAGTGCTGATCGTATAAAGGTTGACGCAAATCTAGCTGCTGCTGCTTTACCATTGTCAATGTTTGATGCTATTGTGTCTGCAGATGCTTTTGAGAATTTGAAACCTGCTCCTGATATTTTCTTAGCTGCATCAAGAATATTGAATGTGCCCCCCAGTGAGTGTATTGTTATAGAAGATGCATTGGCTGGAGTGCAAGCTGCCAAAGCTGCACAGATGAGATGCATAGCAGTCAGGACCACGTTATCAGATGAGGCATTAGAATCTGCTGGCCCAACACTTATCCGAGATGATATAGGAAGTGTTTCACTTGATGATATTCTAAGTGGTGGCTCTGTTGGCTATAATAAGAGGATGCAGGGGTCACAATCTTTTAATAATTCTGCACAATCTTCATCTGCAATGCTTGCTGGAAATTCCAATGGTGAACTTACCGAAACTATGAGTGGTACAAATTGGGGGATTTTCCCATCTGAAGGGTTGCAGGGTTCTCGGCGAGATGTACTGAGATTTGGAAGCCTGGGTATTGCTATCTCTTGCCTCATCTTCACTGTGAATAACTGGAAGGCAATGCAATATGCTTCCCCTAAAGCCATTTGGAATCTGTTGTTTGGTGTAAGCCAACCATCTTTGGAGCAAAAAGATGGCAAATCAAGATCAGATAAGATCCAACAATTTATGAACTATGTAGCTGATCTGGAAGGCAGGGGAGATGCTCAGATTGTGCCAGAATTTCCATCTAAACTTGACTGGCTGAATACAGCCCCTCTTCAGTTTGGCAGGGATCTGAGAGGAAAAGTGGTTCTGCTGGATTTCTGGACTTATTGTTGTATCAATTGTATGCATGTGTTGCCAGACCTGGATTTTTTGGAAAAAAAATACAAAAATATGCCGTTCATAGTTGTGGGTGTCCATTCTGCAAAGTTTGATAACGAGAAAGATTCTGAAGCCATTCGCAATGCAGTGCTACGTTATGGTATCACTCACCCAGTCGTCAATGATGGAGATATGTATCTTTGGCGGAAGCTGGGTATCAGTTCATGGCCAACATTTGCTATCATTGGGCCCAATGGTAATCTCCTTGCACAAATTTCAGGAGAAGGTCACAAGAAGGATCTTGATGACTTTGTGGAGGCAGCACTTCTGTTTTATGGAAAACAGAACACGTTGGACAATACACCAATTACACTGAATTTGGAGAAAGATAATGATCCTCGCCTACTGACATCTCCGTTGAAGTTCCCAGGAAAGCTAGCTATTGATGTCCTTAACAGCAGGCTTTTCGTTTCAGACAGCAACCATAACCGCATAGTGGTAACTGACCTGGATGGTAATTTTATTGTACAAATTGGGAGCAGTGGGGAGGAAGGTTTGCAGGATGGTTCATTTGATGATGCCACCTTTAATCGCCCTCAGGGCCTTGCTTATAATGCAAAGCAAAATATCCTTTATGTTGCGGACACGGAAAACCATGCTTTAAGAGAGATAGATTTTGTCAATGAGCAAGTGCGTACTCTTGCTGGAAATGGGACCAAAGGTTCTGACTATATTGGAGGAAGGAAAGGAACCACTCAGCTCCTCAATTCCCCTTGGGATGTATGCTTTCATCCAGTGGAAGAAAAAATTTACATTGCCATGGCTGGCCAGCATCAGATATGGGAGCACAATATAATGGATGGAATTACAAGAGTATTTAGTGGTGATGGCTTTGAGAGGAATTTAAATGGATCAAGCTCCACAAGCACGTCATTTGCCCAGCCTTCTGGCATTTCATTGTCTCAAGATCTAATGGAGGTATACATTGCTGATAGTGAGAGTAGTTCAATTCGAGCTGTTGATCTGAAAACTGGAGGATCACGGTTGCTAGCTGGTGGTGATCCAATCTTCCCAGATAATTTATTTAAGTTTGGTGATCATGATGGGATAGGCTCTGAAGTACTTCTTCAACATCCACTGGCAGTTTTGTGTGCAAAAGATGGCCAAATTTATATAACAGATAGCTATAATCATAAGATCAAAAAGTTGGATCCAACTAGTAAAAGGGTTAGCACCATTGCAGGAACAGGAAAAGCTGGTTTTAGGGATGGAACAGCTATAGCAGCTCAGCTTTCCGAACCATCAGGAATTGTTGAAGGGAATAATGGGAGAATATTCATAGCTGATACGAACAACAGCTTAATTCGATATCTGGATTTAAACAATGAAGAATTGGAACTTCGTACTTTGGCGTTTAAAGGCTTTCAGCCTCCTTCACCAAAAGCCAGGTTTTTCAAACGCCTAAGGAGACGATCATCAGCAGACACAGTGACCATCACCACTGATGGTGTTTCAACAAATGAAGGAAAGATATCTATTAATGTGACGTTACCAAAGGAGTACCATTTCTCGAAGGAAGCACGTAGTCGATTCACTGTTGATATTGAACCTGAAGATACCGTCAATGTTGACCCCCAGGATGGATTCCTCAGTGATGGATCTGCAACTCTTCATTTTAAGAGATCATCTACCTCGGCTTCAATGGGAAGAATTAATTGCAAGATATACTATTGCAAGGAAGACGAGGTTTGTTTGTACCAGTCCTTACAGTTTGAGGTGCCATTCCAAGAGGGAGTACCTAACTGTACCCCAGCAGACGTCACTCTTGCGTATTTGGTGAAACCCAAAGCTTCAGCTGGGAGCATACTACAGCCCGTTGCGCCGTGA 3249 0.4327 MASKAVHSSLSRPATSFLLSPNLRGLKPISLPLHSFHYRSKRLVLSRRLVLRACVKVEEKDVAENSSAREWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFAELGVQVTVEDFVPFMGTGEANFLGGVATVKGVKGFDPKAVKQRFFEIYLDKYAKPESGIGFPGALELISQCKSKGLKVAVASSADRIKVDANLAAAALPLSMFDAIVSADAFENLKPAPDIFLAASRILNVPPSECIVIEDALAGVQAAKAAQMRCIAVRTTLSDEALESAGPTLIRDDIGSVSLDDILSGGSVGYNKRMQGSQSFNNSAQSSSAMLAGNSNGELTETMSGTNWGIFPSEGLQGSRRDVLRFGSLGIAISCLIFTVNNWKAMQYASPKAIWNLLFGVSQPSLEQKDGKSRSDKIQQFMNYVADLEGRGDAQIVPEFPSKLDWLNTAPLQFGRDLRGKVVLLDFWTYCCINCMHVLPDLDFLEKKYKNMPFIVVGVHSAKFDNEKDSEAIRNAVLRYGITHPVVNDGDMYLWRKLGISSWPTFAIIGPNGNLLAQISGEGHKKDLDDFVEAALLFYGKQNTLDNTPITLNLEKDNDPRLLTSPLKFPGKLAIDVLNSRLFVSDSNHNRIVVTDLDGNFIVQIGSSGEEGLQDGSFDDATFNRPQGLAYNAKQNILYVADTENHALREIDFVNEQVRTLAGNGTKGSDYIGGRKGTTQLLNSPWDVCFHPVEEKIYIAMAGQHQIWEHNIMDGITRVFSGDGFERNLNGSSSTSTSFAQPSGISLSQDLMEVYIADSESSSIRAVDLKTGGSRLLAGGDPIFPDNLFKFGDHDGIGSEVLLQHPLAVLCAKDGQIYITDSYNHKIKKLDPTSKRVSTIAGTGKAGFRDGTAIAAQLSEPSGIVEGNNGRIFIADTNNSLIRYLDLNNEELELRTLAFKGFQPPSPKARFFKRLRRRSSADTVTITTDGVSTNEGKISINVTLPKEYHFSKEARSRFTVDIEPEDTVNVDPQDGFLSDGSATLHFKRSSTSASMGRINCKIYYCKEDEVCLYQSLQFEVPFQEGVPNCTPADVTLAYLVKPKASAGSILQPVAP 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3672 1082 Pfam Haloacid dehalogenase-like hydrolase 77 260 IPR041492 -
Dere01g3672 1082 Gene3D Glutaredoxin 394 566 - -
Dere01g3672 1082 SFLD C1.5.6: HAD, Beta-PGM, Phosphatase Like 73 282 - -
Dere01g3672 1082 Gene3D - 76 274 IPR023214 -
Dere01g3672 1082 Gene3D - 813 914 IPR011042 -
Dere01g3672 1082 Gene3D - 567 736 IPR011042 -
Dere01g3672 1082 Pfam NHL repeat 650 675 IPR001258 GO:0005515
Dere01g3672 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 222 242 IPR006439 -
Dere01g3672 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 172 185 IPR006439 -
Dere01g3672 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 74 85 IPR006439 -
Dere01g3672 1082 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 204 220 IPR006439 -
Dere01g3672 1082 Gene3D Putative phosphatase; domain 2 87 158 IPR023198 -
Dere01g3672 1082 FunFam NHL repeat-containing protein 2 579 735 - -
Dere01g3672 1082 SUPERFAMILY HAD-like 74 283 IPR036412 -
Dere01g3672 1082 NCBIfam HAD-IA family hydrolase 198 260 IPR006439 -
Dere01g3672 1082 CDD NHL-2_like 632 972 IPR045302 -
Dere01g3672 1082 SUPERFAMILY NHL repeat 588 917 - -
Dere01g3672 1082 ProSiteProfiles NHL repeat profile. 830 860 IPR001258 GO:0005515
Dere01g3672 1082 Pfam Thioredoxin-like 447 541 IPR012336 -
Dere01g3672 1082 FunFam Chloroplast protein HCF243 810 914 - -
Dere01g3672 1082 SMART LY_2 587 629 IPR000033 -
Dere01g3672 1082 SMART LY_2 821 864 IPR000033 -
Dere01g3672 1082 PANTHER NHL REPEAT-CONTAINING PROTEIN 2 99 1076 - -
Dere01g3672 1082 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 73 282 - -
Dere01g3672 1082 CDD HAD_BPGM-like 76 262 - -
Dere01g3672 1082 SUPERFAMILY Thioredoxin-like 422 560 IPR036249 -
Dere01g3672 1082 FunFam NHL repeat-containing protein 2 402 566 - -
Dere01g3672 1082 ProSiteProfiles Thioredoxin domain profile. 399 564 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3672 Dere-ChrDere01 50939417 50963964 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3672 01 50939417 50963964 Dere01g3672 01 50939417 50963964 ECH