Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3653 ATGGGTTCTGAATGTCCCCCAGCACTAGTAACAGTTCATGTTACAGGCTTTAAGAAATTCCATGGAGTTTCAGAGAATCCTACAGAATCAATTGTCAATAACTTGACGGAGTATATGAAGAAGGTGGGTGTACCTAAAGGTTTAATTATTGGGAGCTGCAGCATTCTGGAGACTGCTGGTCAAGGAGCACTTGATCCCCTATACAAGACATTGCAATCTGCCATTAGCTCCAAGGATTCTGAATCTTCCAATTCCAATAAAATTATATGGCTGCATTTTGGGGTTAACAGTGGTGCAACAAGGTTTGCTATAGAGCATCAAGCTGTCAATGAAGCTACTTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCAATTGTTCCTTCAGATGGTGGAATTTCACGAACACGGGAGACCTCCCTTCCTGTAGAAGAGATCACCAAGGCATTGGCAAAGAAGGGTTATGATGTGATGACTTCTGATGATGCTGGCAGGTTCGTGTGCAATTACGTGTACTATCACTCCCTTCGTTTTGCTGAGCAAAACGGGACAAAATCCCTGTTTGTGCACGTGCCTCTGTTCTTGACAATCGATGAGGAGACTCAAATGCAATTCGCTGCTGCCTTGTTAGAGGTACTTGCTTCTATATTATAG 663 0.4389 MGSECPPALVTVHVTGFKKFHGVSENPTESIVNNLTEYMKKVGVPKGLIIGSCSILETAGQGALDPLYKTLQSAISSKDSESSNSNKIIWLHFGVNSGATRFAIEHQAVNEATFRCPDEMGWKPQKVPIVPSDGGISRTRETSLPVEEITKALAKKGYDVMTSDDAGRFVCNYVYYHSLRFAEQNGTKSLFVHVPLFLTIDEETQMQFAAALLEVLASIL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3653 220 PIRSF Pyrrolidone-crbxlat_pptds 9 219 IPR000816 GO:0005829|GO:0006508|GO:0016920
Dere01g3653 220 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 11 218 IPR036440 -
Dere01g3653 220 FunFam Pyrrolidone-carboxylate peptidase isoform A 9 219 - -
Dere01g3653 220 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 10 218 IPR016125 -
Dere01g3653 220 Pfam Pyroglutamyl peptidase 12 197 IPR016125 -
Dere01g3653 220 CDD Peptidase_C15 10 218 IPR000816 GO:0005829|GO:0006508|GO:0016920
Dere01g3653 220 Gene3D - 9 219 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3653 Dere-ChrDere01 50799077 50801014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3653 01 50799077 50801014 Dere02g0009 02 97643 99546 CCT
Dere01g3653 01 50799077 50801014 Dere01g3653 01 50799077 50801014 ECH