Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3640 ATGGGTTCCAAAGCAGGAGCAAGTTCTGTTGATCTATGGTCAGAAATTGTAGCCGCTGATGCGCAACAACTGCAGCAGCAACATATTGAGGTGGTCTACAGAAGAAGAAAACCCCAGAACAACCAAAAGGGCGTAAACTTAAATCATTCTGATTCTGGTCGTCCGCATGGGAATCGCGTGAGTTTGGTCGACCCAAACAAGCGAGTTAGTTGGAATCGGTCTCTTTCGACAAGAGGGAGGACAAGTATAGCTGTTGGAGCTTGTATGGTTTACCAACCTCAATTAAAGAAGGATAAAAGAAAAGGGAAACCTGCTCTTCCCAAAGGAAAGTTTGTAAAACCTCCTGACTTTGAGAAGGAGAAAGCATACTTTGACGAGGTTGATGCTTTTGAGTTGTTAGAGGAGAGCCCCTCGCCCAAGAAAGTTGGCACATGGACCATAGGCAATGAAAAGGACATTGTCCAGATACCACATTTATGCTCAAGATTAGAAAAATGGTTAATGTCCAGGAAATTGAACCTCAGTTGTGGTCCCTCTAGCACACTTTCAGAAAAATCTGCGGAAGTCAATCCACATCTGCATCTTGATGAAAGTCTATATGAGGGGGACTTCAATCTGCAAAATGATAAAATGTTGGCTCAAGATGATGAAGGTTGTGAAAATATAGAAGCTGCAGTTAAGAAACTCTCTCTGACATCAACATCAGCTTCAGTAGATGAACATTTTAGTCCATTTGCTGCTTTATTAACAATATGTGGACAGTCTGTGCCTTCAAAGCTGCAAGATGTGCTCTCTAAGTATTGTGATCCAGAAACTATTGTCAAAATTGGTGAAGGAACATATGGAGAAGCTTTCAAGATTGGTAGCTATGTCTGCAAAATAGTTCCTATTGATGGAGACTTCAGGGTGAATGGGGAAGTCCAAAAGAGATCAGAAGAGTTGCTGGAGGAGGTGGTTCTTTCCAAAACTCTTAACTATTTGAGGATCAACGATGGAAATGCCCAAAATTCTTGTGGAATATTCATTGAAACGATTGAATTTAGTGTATGCCAAGGTCCCTATGATGCTGCACTGATTCAAGCATGGGAAGATTGGGATGAAAAGCATGGTTCAGAGAATGATCACCCTAAAGAGTTTCCAGAGAAACAGTGTTATGTGGTGTTCATACTACAACATGGTGGCAAGGATCTTGAAAGCTTTGTACTCTTGAATTTTGACGAGGCAAGGAGTTTACTGGTTCAGGTTACTGCTGGGCTTGCTGTGGCTGAGTCTGCATATGAATTTGAACATCGCGATCTTCACTGGGGAAACATACTTTTAAGCCGAAGCGACTCTGTGATGCTGAAGTTCACTCTTGATGGCAGGCATATGTTTGTTAAAACATATGGATTGTCAATATCTATTATTGACTTCACTTTGTCAAGAATAAACACAGGTGATGATATACTCTTTTTGGATCTTTCCTCAGATCCTGACCTCTTCAAAGGTCCTAAAGGGGACAAACAGTCAGAAACATATAGGAAGATGAAGGAGGTAACAGAAGATTGGTGGGAAGGAAGTTTTCCTAGAACAAATGTGTTGTGGTTGATCTACTTGGTCGATATACTGCTGATGAAGAAATCATTTGAACGTACTTCAAAGGATGAGAGAGAACTGCGTTCCTTGAAGAAACGTCTGGACAAGTATAATTCAGCCAAGGAAGCAATTTTTGATCCTTTCTTCGGTGAATTGTTCGTTGTGGGCGACAGCCGAATCTCACATGATATGTGTGCACTGTTATCGTGGCATTGTGGACTTACAACTCATGCTGATCTCACTTGTCTTTTTCCCTGGAATCTCCCCAATCGCCTAATGGCAGACAATACTTTCATGCATTCAATATACACTCAAGCTGTATCAATCACACTGAAATTTCAAAGGGGCCTTTCTGCATTCCACTCTCACTCTCTTACAATGGCCAACCCTGCTTCCTTATGCTCCTTCTTTCTTTATCTCTTCGTCGTCTGCTGTTCGGGAACTCCTGTGGGTTTTTCCTATCGTGAAATAGGGGACGCTAGAACCACATCATTCCTCAAGCAAAACAAGGTGCCCCTGTCTCATAGTCGAATTTTTGTCATGGATCATAGAATTTTGAGCACTCTCACGGACTTCCACGATTTAGGCCAAAATGAGATACCTTTACTAGTATCTGCACTGAAATCTATTCATTCAGCTCTCACTAAGCTTCGTCTAGGCAGGGAAGTAAAGGTGTCAGTAGCATTTCCACTGTCATTCTTAGAGAAGTTGAAAATTTTACGCGAGAATGATCTTCATAGGATTCTGTCATTTATAAAGGAAACAAATTCCTTTGCTATGATAGAATACAGCATTGATGGGGAAATAAGCATGGGGGATCATTTTGTTCAGTCTATTATCAAACGAGCCACTCTTGCTGCTTCTATCCTTCCTTACAAAGATGTTCCCTTGGTTCTAACAATCAAGAGCCCAGCTATTCCCAGTTCAACAGAAGTAGCTCAATTTAGCCAAAGGGTATCCAATTATCTTGAAGCAACAAGCACTAAGGTCAGTGGTAGGATAATTGCATTATTTGGAGAAGTACATGCAACAGAAACTTTCGAGCAGGAAGAGCTCAAAAGGAAAGAGGAAGAGATCTTTCCTTTGTTCCGTAGAGAAATCCTTGGCAAATTCCACATCAGAAGAATTCTAGATGACACAACCAACCCGGCAAATGTAGTTTACCCCAAAAATCCAACTTCAGCTACACCAGTGATTACACCCCCAGATACACCAACCATCATTACAGTTCCTTCCACCAATCCTGTCACTGTTTCTCCCACCAATCCGGCTGCAACGCCTGTGACAGTTCCTTCCACAACCCCAGTGCCATTACCTCCAACAAATCCCGCTAATCCAGGTATAACCCCAATAACAGTTCCAGGAGCACAACCAGCAACATATTATCCACCCCCATCGGGAGTTGTTCCTGTGGTGAATCCCACTCCGCCTCCTGCAAGTACTAATGCTCCAGCACTAGCAGGGCAGAGCTGGTGTGTGGCGAAGACCGGAATTGCAGAGACTGCTCTTCAATCAGCACTGGACTATGCTTGTGGAATGGGTGGTGCAGACTGTTCACAAATCCAGCAGGGCGGAAATTGTTACAATCCAAATACTCTTCAAAACCATGCTTCTTATGCCTTCAACAGCTACTACGAAAAAAATCCAGCACCAACAAGTTGTGACTTTGGAGGGACTGCCACCCTAGTTAACGTGAATCCAAGCTCGGGTTCTTGCATTTATACATCATCTTCTTCCTCTTCTTCATCCTCAAACCCAATGCCATCTTCACCAACAACTACTCCATCAACTCCAACTCCAACATCTTCATCATCAGGGACAGGCGCATCAGGCTACGGCTCCCCGCCTTCAGTATTGAATTCAAGCAGCCCAGAATTGGGTACGGGTACTTCACCAGTTTTTGGGTCTGAAAGCCCTCCAGGTGGAAATACCGCATCATCTTCGCATTCAGCTGGTTTGCAACCTTTTCTAGGTTTCATTGTTCTGGTGATGTCATTGGTCACTGGAAAATTTACGATGCGCCATTAG 3603 0.4299 MGSKAGASSVDLWSEIVAADAQQLQQQHIEVVYRRRKPQNNQKGVNLNHSDSGRPHGNRVSLVDPNKRVSWNRSLSTRGRTSIAVGACMVYQPQLKKDKRKGKPALPKGKFVKPPDFEKEKAYFDEVDAFELLEESPSPKKVGTWTIGNEKDIVQIPHLCSRLEKWLMSRKLNLSCGPSSTLSEKSAEVNPHLHLDESLYEGDFNLQNDKMLAQDDEGCENIEAAVKKLSLTSTSASVDEHFSPFAALLTICGQSVPSKLQDVLSKYCDPETIVKIGEGTYGEAFKIGSYVCKIVPIDGDFRVNGEVQKRSEELLEEVVLSKTLNYLRINDGNAQNSCGIFIETIEFSVCQGPYDAALIQAWEDWDEKHGSENDHPKEFPEKQCYVVFILQHGGKDLESFVLLNFDEARSLLVQVTAGLAVAESAYEFEHRDLHWGNILLSRSDSVMLKFTLDGRHMFVKTYGLSISIIDFTLSRINTGDDILFLDLSSDPDLFKGPKGDKQSETYRKMKEVTEDWWEGSFPRTNVLWLIYLVDILLMKKSFERTSKDERELRSLKKRLDKYNSAKEAIFDPFFGELFVVGDSRISHDMCALLSWHCGLTTHADLTCLFPWNLPNRLMADNTFMHSIYTQAVSITLKFQRGLSAFHSHSLTMANPASLCSFFLYLFVVCCSGTPVGFSYREIGDARTTSFLKQNKVPLSHSRIFVMDHRILSTLTDFHDLGQNEIPLLVSALKSIHSALTKLRLGREVKVSVAFPLSFLEKLKILRENDLHRILSFIKETNSFAMIEYSIDGEISMGDHFVQSIIKRATLAASILPYKDVPLVLTIKSPAIPSSTEVAQFSQRVSNYLEATSTKVSGRIIALFGEVHATETFEQEELKRKEEEIFPLFRREILGKFHIRRILDDTTNPANVVYPKNPTSATPVITPPDTPTIITVPSTNPVTVSPTNPAATPVTVPSTTPVPLPPTNPANPGITPITVPGAQPATYYPPPSGVVPVVNPTPPPASTNAPALAGQSWCVAKTGIAETALQSALDYACGMGGADCSQIQQGGNCYNPNTLQNHASYAFNSYYEKNPAPTSCDFGGTATLVNVNPSSGSCIYTSSSSSSSSSNPMPSSPTTTPSTPTPTSSSSGTGASGYGSPPSVLNSSSPELGTGTSPVFGSESPPGGNTASSSHSAGLQPFLGFIVLVMSLVTGKFTMRH 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3640 1200 SMART DUF3635_2 491 574 IPR024604 -
Dere01g3640 1200 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 208 575 - -
Dere01g3640 1200 FunFam Serine/threonine-protein kinase haspin-like protein 257 392 - -
Dere01g3640 1200 FunFam serine/threonine-protein kinase haspin 393 576 - -
Dere01g3640 1200 Pfam X8 domain 1016 1086 IPR012946 -
Dere01g3640 1200 MobiDBLite consensus disorder prediction 937 956 - -
Dere01g3640 1200 Coils Coil 545 565 - -
Dere01g3640 1200 SMART X8_cls 1015 1099 IPR012946 -
Dere01g3640 1200 Gene3D Phosphorylase Kinase; domain 1 257 392 - -
Dere01g3640 1200 Gene3D Transferase(Phosphotransferase) domain 1 393 574 - -
Dere01g3640 1200 SUPERFAMILY Protein kinase-like (PK-like) 256 539 IPR011009 -
Dere01g3640 1200 MobiDBLite consensus disorder prediction 937 954 - -
Dere01g3640 1200 MobiDBLite consensus disorder prediction 1101 1174 - -
Dere01g3640 1200 MobiDBLite consensus disorder prediction 39 55 - -
Dere01g3640 1200 PRINTS Proline rich extensin signature 962 974 - -
Dere01g3640 1200 PRINTS Proline rich extensin signature 983 1004 - -
Dere01g3640 1200 PRINTS Proline rich extensin signature 920 932 - -
Dere01g3640 1200 PRINTS Proline rich extensin signature 940 956 - -
Dere01g3640 1200 PRINTS Proline rich extensin signature 1109 1134 - -
Dere01g3640 1200 MobiDBLite consensus disorder prediction 34 62 - -
Dere01g3640 1200 ProSiteProfiles Protein kinase domain profile. 270 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere01g3640 1200 Gene3D - 1010 1112 - -
Dere01g3640 1200 Pfam Haspin like kinase domain 229 570 - -
Dere01g3640 1200 FunFam Glucan endo-1,3-beta-glucosidase 4 1010 1103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3640 Dere-ChrDere01 50672190 50682180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3640 1001 1097 Glycoside Hydrolase AT2G05790 53.061 2.94e-25 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3640 01 50672190 50682180 Dere02g0003 02 40502 40831 CCT
Dere01g3640 01 50672190 50682180 Dere01g3640 01 50672190 50682180 ECH