Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3529 ATGATTCGGATTTCCCCTTCGCAATCCACCTCAAAACGATGCCGAAATCAACAATTTAGTATTGGACCTTGGTTAGGTTGGAGCCCAGCAACTTCAACGTGCAATTGCAAGCCACGTATCCGATCCATGCGTCGTTTCGCGGCCTGCGTGCTCAGTAATTGCGTTTCCCTGTTGAAACACAAGAGAAGCGTTCAGTGCGAGGCTCAACTCATTAGGTGTTTCAGGGAAATAATGACGTCTACCATGGCCACATTGCACTTTTTTAATCCTCCAACTTCTCATCTCAAAGAAGTCGGACTTCCTTTTAAAGATTACAGATCGAATGCCCAGAGCTACCGTTATTCTCAATTTCCCTTGCTCTCTCTAGGACGCAATCGCAATGCCACGACCGCGGTTCTTCCCAAAATCAGGGCCCAGAGTCTTCCTGATTATGTTCCCGATTCCAAGTTTTACAAGGTGGAAGCGATTCTCAGGCCTTGGCGAATCCCTCAGGTTTCTTCGGCTTTGTTGAAAATGGGAATCCGTGGCGTCACAGTATCTGATGCCAGGGGCTTTGGATCTCAGGGTGGTTCAAAAGAGAGGCACGGAGGCTCCGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAGATGGAAATAGTAGTGAGCAAGGGTCAGGTTGAAGCGGTAATTGATAAGATTATCGGGAAGTCAAGAACTGGGGAGATTGGTGATGGCAAAATTTTCTTGACACCTGTTGCAGATGTTATAAGAGTTCGCACAGGTGAGCGTGGGGAAATGGCAGTGAGGATGACTGGCGGGGCAGCTTCTGCTGTATGA 819 0.4737 MIRISPSQSTSKRCRNQQFSIGPWLGWSPATSTCNCKPRIRSMRRFAACVLSNCVSLLKHKRSVQCEAQLIRCFREIMTSTMATLHFFNPPTSHLKEVGLPFKDYRSNAQSYRYSQFPLLSLGRNRNATTAVLPKIRAQSLPDYVPDSKFYKVEAILRPWRIPQVSSALLKMGIRGVTVSDARGFGSQGGSKERHGGSEFSEDNFVAKVKMEIVVSKGQVEAVIDKIIGKSRTGEIGDGKIFLTPVADVIRVRTGERGEMAVRMTGGAASAV 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3529 272 PANTHER NITROGEN REGULATORY PROTEIN P-II 116 269 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 SUPERFAMILY GlnB-like 151 262 IPR011322 -
Dere01g3529 272 PRINTS P-II protein signature 202 225 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 PRINTS P-II protein signature 233 253 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 PRINTS P-II protein signature 151 166 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 PRINTS P-II protein signature 172 190 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 Pfam Nitrogen regulatory protein P-II 151 258 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 Gene3D - 138 272 IPR015867 -
Dere01g3529 272 SMART P_II_3 153 255 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 ProSiteProfiles P-II protein family profile. 150 262 IPR002187 GO:0006808|GO:0030234
Dere01g3529 272 ProSitePatterns P-II protein C-terminal region signature. 233 246 IPR017918 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3529 Dere-ChrDere01 49653704 49657102 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3529 01 49653704 49657102 Dere01g3529 01 49653704 49657102 ECH