Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3520 ATGGATGCCAAGGACATCCTAGGTTTGCCCAAAACTTCTTTGCCAATCCAAGAGAAAAAGTCTCGACCGCAGAAAGATTCACAGAGAAAACCAGATGGCATTTCACGGGAGGTTTATGCGCTTACTGGTGGTTTGGCACCTCTTATGCCTGCAATTGATTCGTCTCAATTGAAGAAAAGGCCTCCATCAGACGAGAAGATCACTTGGCAGTGGCTTCCTTTCACCAATTCTGCTCGCAAAGATAATCTTCTACTTTACCATTGGGTCCGAGTTGTAAATGGTGTCACACCAACTGGGGACTATTCTTTTGCCAAGTATAACAAGTCTGTAGACATTATCAAATACACAGATGAGGAGTATGAGAAGTATCTGACAGATCCTATGTGGACCAAGGAAGAGACAGATCAACTGTTTGACTTGTGTGAGAGGTTTGATCTCCGGTTCATTGTTATAGCTGACAGGTTCCTGTCATCACGAACTATAGAGGAATTGAAAGACCGATACTATAGTGTATCTCGGGCTATATTAATTGCCAGGGCTCCATCTCCTGGGGACGTTGCAACACATCCTTTGGTTAAGGAACCATATAATGTTTCACAAGAGGTAGAGAGGAAACGAGCACTGTCCATGTACCTCTCTCAAACAAAGCAACAGGAGCGAAAAGATCAAGAGGTTCTTGCTGAGGCAAAAAGAATCACTGAGTCGCGCATGCCAGCCAAGGTTGCTGAAGAGTCTGAAGTCGCCGCTTCAAATGCTGGTGCAGAAGCTACTGAGAGGGCTATCCCTGGTGATACTCCATCAAGTGTTCAGCTTCCATCCACTGTTCCTTCCACATCAACAGCAGATAATGCATCCACTCTTGCTTCCCTCCGCATACTTCGTGTGTATCTGAGAACATATGCACTTGAGCAAATGGTGCAAGCTGCAAGCTCATCTGCTGGACTACGGACTATCAAACGGGTGGAGCAAACACTACAAGAACTTGGGGTTAATTTAAAACCAAGGGTTCCAACTAAAGCTGTTTGCGCTGAGCATCTTGAACTTAGAAAAGAAATACTAACTCTGCTAAATCTTCAGAAACAGCTGCAGTATAAGGAGGCAGAAGGTTCATCTTTTCGTGATGGTTCATACACTGAAACACCTGGCACACCAAAGCGATTACATCATCTTGGGGATCAGGATAGGACATTTGTTCCAGACACCGTGAGTTTTGGAGGGGATAGAATTGGTAAAAGGGATCAGAAACGCAAGGCACCTGGACGGATAGCAGAAGCTCCATCTTCACCAGCTCAGTCTAAAAGACCTAGAAAACTAAAGGCCTCAGATCTATAG 1332 0.4489 MDAKDILGLPKTSLPIQEKKSRPQKDSQRKPDGISREVYALTGGLAPLMPAIDSSQLKKRPPSDEKITWQWLPFTNSARKDNLLLYHWVRVVNGVTPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPMWTKEETDQLFDLCERFDLRFIVIADRFLSSRTIEELKDRYYSVSRAILIARAPSPGDVATHPLVKEPYNVSQEVERKRALSMYLSQTKQQERKDQEVLAEAKRITESRMPAKVAEESEVAASNAGAEATERAIPGDTPSSVQLPSTVPSTSTADNASTLASLRILRVYLRTYALEQMVQAASSSAGLRTIKRVEQTLQELGVNLKPRVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAEGSSFRDGSYTETPGTPKRLHHLGDQDRTFVPDTVSFGGDRIGKRDQKRKAPGRIAEAPSSPAQSKRPRKLKASDL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3520 443 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Dere01g3520 443 Gene3D - 98 183 - -
Dere01g3520 443 SMART sant 125 174 IPR001005 -
Dere01g3520 443 CDD SANT_DMAP1_like 129 171 - -
Dere01g3520 443 SUPERFAMILY Homeodomain-like 128 171 IPR009057 -
Dere01g3520 443 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 311 375 IPR008468 GO:0005634|GO:0045892
Dere01g3520 443 MobiDBLite consensus disorder prediction 1 36 - -
Dere01g3520 443 MobiDBLite consensus disorder prediction 263 281 - -
Dere01g3520 443 MobiDBLite consensus disorder prediction 237 281 - -
Dere01g3520 443 MobiDBLite consensus disorder prediction 367 443 - -
Dere01g3520 443 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 427 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Dere01g3520 443 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Dere01g3520 443 MobiDBLite consensus disorder prediction 406 420 - -
Dere01g3520 443 MobiDBLite consensus disorder prediction 18 33 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3520 01 49587280 49592473 Dere01g3520 01 49587280 49592473 ECH