Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3518 ATGGCCACTCTTACAGCCTCTGGATTTCTGAAACCCTCGACTTGTTTCATAATCAGAGCTCAATACCATGAATACCCAGTTTTCGTATCCCCCAAACAAAACAAGTTCTTCCCACACAAGCGATTCCATGAAAAGAAAACGACAGTTCCATTCGTCTCCAACCAGTCAAGTGCGCCCACGGGGTCTTCGCCGGGATTATACTCTGCCCAGAAATTCGATCTCACCGTTTCGAACGTGGACCTTGTTCTCGAGGATGTTCGCCCTTACCTCATCGCTGACGGTGGCAACGTAGATGTTGTGTCTGTTGAAGATGGCGTTATATCTCTCAGGCTCCAAGGAGCATGTGAAAGTTGTCCTAGCTCAACCACAACAATGAAGATGGGGATTGAACGTGTACTTAAGGAAAAATTTGGAGATGCAGTCAAGGATATACGGCAAATATATGATGATGAAAAGAGGGAGACAACTGTTGAGGCTGTGAATAACCATCTTGATATCTTGAGACCGGCCATTAAGAATTATGGAGGCAGTGTGGAAGTCTTATCTGTCGAAGGAGGGGACTGCCACGTGAAGTATGTGGGGCCTGACTCCATTGGATCAGGAATCAAAGCAGCCATCAGGGAGAAGTTTCCGGACATTGTGAATGTTGTTTTCTCCAGCTAG 663 0.4646 MATLTASGFLKPSTCFIIRAQYHEYPVFVSPKQNKFFPHKRFHEKKTTVPFVSNQSSAPTGSSPGLYSAQKFDLTVSNVDLVLEDVRPYLIADGGNVDVVSVEDGVISLRLQGACESCPSSTTTMKMGIERVLKEKFGDAVKDIRQIYDDEKRETTVEAVNNHLDILRPAIKNYGGSVEVLSVEGGDCHVKYVGPDSIGSGIKAAIREKFPDIVNVVFSS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3518 220 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 153 217 IPR034904 -
Dere01g3518 220 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 59 217 - -
Dere01g3518 220 Gene3D - 156 218 IPR034904 -
Dere01g3518 220 Gene3D - 71 155 IPR034904 -
Dere01g3518 220 Pfam NifU-like domain 80 139 IPR001075 GO:0005506|GO:0016226|GO:0051536
Dere01g3518 220 FunFam NifU-like protein 1 chloroplastic 155 218 - -
Dere01g3518 220 FunFam NifU-like protein 3, chloroplastic 71 154 - -
Dere01g3518 220 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 76 146 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3518 Dere-ChrDere01 49582069 49583517 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3518 01 49582069 49583517 Dere01g3518 01 49582069 49583517 ECH