Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3510 ATGAAAACTCCAATGGATAATGCACATAAGGATGCTGTTGCCTTTCTTCATCGGCGTTTTGCCGTGCGGGAAGTGCGTCGTCTCCATAACTGGATTCGATTAAGAGAGGGTAATTTTATGGCAACTAGACCTGATCCAGATATTGACGACGATTTTAGTGAACTTTATAAGGAGTACACTGGCCCCCTGGGAACTGCTACTACTAATACCCAAGACAAGGGAAAATCAAACAAGAGATCCCATGCAGGGTCAGACGAGGAGGAGGAGCCTCGTGACCCCAATGCTGTCCCAACTGATTTCACTAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACCGAGAGGAATTGGAAGAAAAGGAAAGAAGAAGAAATGATCTGCAAACTCTGTGGTGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACGCTAGGAGCCAATCGCAAGTCTCAAGATTTCTTTGAAAGAATTCCAGCAAGAGACAAACATATAAGAGCACTTTTCACAGAGAAAGTTATAAGCAAGATTGAAAGGGATATTGGCTGCAAAATAAAGATGGATGAGAAATTTATTATTGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTAGAGAGGAGGGTAATCAAAGGGGGTCTTCTAGCTCTCACTTGACCAGATCTAGGTCACCTGAGAGAAGTCCTGTTGGTGCACGGTTTCAACGCTCTGAGCCCCAAAGGTCTCATTCTGGACCCCGTAATACTCCCCATTTTCAACAAAGGTTTGGTAGACAAGAGAGGGTTGTTGAAGATCGTGTGAGAGAGGACTTTCAAAAATTTCCAAGAGGTTCTCCACAAGCTTATGGAAATAGTGGAGCTAGAGGTCGATCAAGCCATTCAAGATCTCCAAGACAAGCGCCTTATACAGGCAACCCATATAGTTCATATGATGACCGTAATCTGAACATGGGAGCATATAGAAATGATGGTTGGGATTCTCAAACAAGAGAATCTGATGTCCAATCTGGTCATCAGTTTGATTACAATGCCTTCCCACAGACATTAGAAGAACTAGAGATGGAGTATAAGAGGGAGGCCACAGAGCTTGTGAAAATCCGTGACAGAGAAGAAGATGAAGAAAATTTCAGGCATCGTGAGGCTGTTAGAGATATGAGGGAGAATTACATGAACAAAGTTGCTATGCTGAGGGCAACACATGCCAAACAGTGGGAAGAATTTCTTCAGCTTGATGCCCAGAGGCGTCAACAACAGGCTATTCAACAAATGCCCACTTCTGGTTTTGGGGGTTATAAACAGCAGAACTTCTCTGAATATGATGGGTCCGCTGCCAATTCTCACTATACTGGTGCCAACTTACCCTTGGAATTGAGGAACAGGTTCTCAAACACTATGGAAAACTATCCTACTAGGCGTCATGATAATTTTGGTGAATTTCAGAGGCGTGGAGATTTTGGGAAAGCTTACAACAGATATTGA 1503 0.4351 MKTPMDNAHKDAVAFLHRRFAVREVRRLHNWIRLREGNFMATRPDPDIDDDFSELYKEYTGPLGTATTNTQDKGKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKHIRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGNQRGSSSSHLTRSRSPERSPVGARFQRSEPQRSHSGPRNTPHFQQRFGRQERVVEDRVREDFQKFPRGSPQAYGNSGARGRSSHSRSPRQAPYTGNPYSSYDDRNLNMGAYRNDGWDSQTRESDVQSGHQFDYNAFPQTLEELEMEYKREATELVKIRDREEDEENFRHREAVRDMRENYMNKVAMLRATHAKQWEEFLQLDAQRRQQQAIQQMPTSGFGGYKQQNFSEYDGSAANSHYTGANLPLELRNRFSNTMENYPTRRHDNFGEFQRRGDFGKAYNRY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3510 500 SUPERFAMILY Retrovirus zinc finger-like domains 116 148 IPR036875 GO:0003676|GO:0008270
Dere01g3510 500 Coils Coil 357 377 - -
Dere01g3510 500 MobiDBLite consensus disorder prediction 61 107 - -
Dere01g3510 500 ProSiteProfiles Zinc finger CCHC-type profile. 129 144 IPR001878 GO:0003676|GO:0008270
Dere01g3510 500 MobiDBLite consensus disorder prediction 214 346 - -
Dere01g3510 500 MobiDBLite consensus disorder prediction 265 281 - -
Dere01g3510 500 MobiDBLite consensus disorder prediction 329 346 - -
Dere01g3510 500 MobiDBLite consensus disorder prediction 292 320 - -
Dere01g3510 500 MobiDBLite consensus disorder prediction 74 94 - -
Dere01g3510 500 MobiDBLite consensus disorder prediction 243 263 - -
Dere01g3510 500 PANTHER OS01G0252900 PROTEIN 40 500 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3510 01 49526483 49532150 Dere01g3510 01 49526483 49532150 ECH