Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere01g3503 ATGGCTCCTCCCAACGACCCAGTCATTGCTCCCTTCGGCTTCCTCGGCTCTGAACCATTGGAAAATATTTTTGGCTTAACTGATGGGAAGCTCACTGTCAGAGGTGTGCCATTGCTCACGCAAGTCCCTCACAACGTCACTTTCAGTCCCTTCTCTTGTATTTGTCAATCCTCTGAGGCTCCTCCTACTCTGCTTCAGCGCGTGCTTGCTCAATCTCACACGGGTGGATTCCTTGGGTTCTCCCAGGAAGAGCCGTCCGATAGGGTGATGAACTCCTTGGGTAGATTCAGCGGTAGGGACTTCCTTAGTATCTTCAGGTTCAAAACATGGTGGTCTACCCAGTGGGTGGGAAATTCTGGCTCTGACTTACAAATGGAAACCCAGTGGGTGCTCTTTCATCTTCCTGAAATTAAGTCCTACGCCATAATTATTCCTATCATTGAAGACAGTTTTAGGTCTGCCCTTCATCCTGGCTCTGATGGCCACGTCATGATTTGCGCCGAGAGTGGATCTACCCAAGTGAAAGCATCGAGTTTCGATGCCATAGCTTATATTCATGTGTCTGAAAATCCGTACAACTTAATGAAGGAGGCCTACACTGCTCTGAGGGTTCACCTCAATACTTTTAGGCTCTTGGAAGAGAAAACCACACCGAATTTGGTTGATAAATTTGGGTGGTGTACTTGGGATGCATTCTACCTAACTGTTAACCCAGTGGGAGTATGGCACGGATTGAAAGATTTCGCCGATGGTGGGGTGGCTCCGAGGTTTCTCATCATCGACGATGGTTGGCAAAGCATCAATTTTGACTGTGAAGACCCCAACGAGGATGCTAAAAATCTTGTTTTAGGTGGCGAACAAATGACTGCAAGGCTTCACAGGCTCGACGAAGGTGATAAGTTCAAAAATTACAAAGGTGGTCTCATGATGGGTCCTAATGCTCCTTCTTTTGACCCCAAAAATATCAAAGCCCTGATAAATAAGGGAATTGAACTTGAGCGTTTGCAGAAGGAACGTGACCTTGCCATAGAATCTGGGAGTGCCAATTTGTCCCTGATTGAATCGGGAATCCGGAAGGTGAAACAAGAAATCGACGATCTATTTGGGGCAGAGCAAAGCCGCGCTTCAAACAAAGATTGTGGAAGCCTGCATGGCGAAGCAGAGGAGTATGGGATGAAGGCATTCACAAGGGATTTGAGATCCAAATTCAGAGGTTTGGATGACATTTACGTTTGGCATGCCCTTTGTGGCGCTTGGGGTGGCGTGAGGCCTGGAACAACACACCTGAATTCGAAAATAATCCCCTGCAAACTCTCCCCTGGGCTTGATGGGACAATGCATGATCTTGCTGTGGTGAAAATCGTTGAAGGCTCGATTGGCCTTGTTCATCCGGATCAAGTCAATGACTTCTATGATTCTATGCACTCCCATCTTGCCAAATCCGGTATAACAGGAGTCAAAGTGGACGTCATTCAAACTCTTGAGTATGTGTGCAATGAATATGGAGGAAGAGTGGAGCTTGCTAAGGCCTACTATGATGGGCTAACAAATTCCATTGCGAAGAATTTCAGTGGAAATGGAATCATCGCTAGCATGCAACAGTGCAATGACTTTTTCTTCCTCGGGACGAAGCAAGTGTCCTTGGCAAGAGTTGGGGATGACTTCTGGTTTCAAGATCCGAATGGTGATCCAATGGGAGTGTTCTGGTTACAAGGGCTACATATGATCCACTGTGCTTATAATAGCTTGTGGATGGGGCAGATGGTTCAGCCCGATTGGGACATGTTCCAATCAGATCATGTGTGTGCCAAATTCCATGCAGGGTCAAGGGCCATTTGTGGTGGTCCGATCTATCTGAGTGACTCAGTGGGTTCTCATGATTTTGATCTCATTAAGAAGCTTGTGCATCCTGATGGCACCGTTCCAAAGTGCGTCCATTTCCCCCTTCCAACCAGAGACTGCCTTTTCAAGAACCCTCTATTCGACCAGAAAACCGTCCTCAAGATTTGGAACCTCAACAAGTATGGTGGGGTGATTGGTGCTTTTAACTGCCAAGGTGCCGGTTGGGACCCCAAAACGCACAGGTTCAGAGGCTTCCCTGAGTGCTACAAGCCAGTCTGTGGTTCAGTACACGTCTCTGAGATTGAATGGGACCAGAAGAAAGAAGCAGCCCATCTGGGCAAGGCAGAGGAATACTTAGTGTACCTCAACCAGGCTGAGGAACTGCGTCTCATGACCCAAAAGTCTGAACAGTTCCAAATTACCCTCCAACCTTCCACCTTTGAGCTCTTCAGCTTCGTACCAGTCACGAAGCTAAAGCGCAGCATCAAATTCGCACCCATTGGCCTGACAAATATGTTCAATAGCGGAGGGACAATTGAAGAATTGGAATACAGTGAGGTTGGTGCCAGGCTCAAGGTTAAAGGTGGGGGAACTTTTCTTGCTTACTCAAGTGAGTCTCCTAACAAGTGTCAATTGAATGGTGCTGAGCTACCTTTGGAGTGGCTGCCTGATGGCAAATTGAGGCTCACCCTGGCTTGGAATGAAGATGCTGGAGGGGTCTCTGATATTGCAATATTCTATTAG 2586 0.4741 MAPPNDPVIAPFGFLGSEPLENIFGLTDGKLTVRGVPLLTQVPHNVTFSPFSCICQSSEAPPTLLQRVLAQSHTGGFLGFSQEEPSDRVMNSLGRFSGRDFLSIFRFKTWWSTQWVGNSGSDLQMETQWVLFHLPEIKSYAIIIPIIEDSFRSALHPGSDGHVMICAESGSTQVKASSFDAIAYIHVSENPYNLMKEAYTALRVHLNTFRLLEEKTTPNLVDKFGWCTWDAFYLTVNPVGVWHGLKDFADGGVAPRFLIIDDGWQSINFDCEDPNEDAKNLVLGGEQMTARLHRLDEGDKFKNYKGGLMMGPNAPSFDPKNIKALINKGIELERLQKERDLAIESGSANLSLIESGIRKVKQEIDDLFGAEQSRASNKDCGSLHGEAEEYGMKAFTRDLRSKFRGLDDIYVWHALCGAWGGVRPGTTHLNSKIIPCKLSPGLDGTMHDLAVVKIVEGSIGLVHPDQVNDFYDSMHSHLAKSGITGVKVDVIQTLEYVCNEYGGRVELAKAYYDGLTNSIAKNFSGNGIIASMQQCNDFFFLGTKQVSLARVGDDFWFQDPNGDPMGVFWLQGLHMIHCAYNSLWMGQMVQPDWDMFQSDHVCAKFHAGSRAICGGPIYLSDSVGSHDFDLIKKLVHPDGTVPKCVHFPLPTRDCLFKNPLFDQKTVLKIWNLNKYGGVIGAFNCQGAGWDPKTHRFRGFPECYKPVCGSVHVSEIEWDQKKEAAHLGKAEEYLVYLNQAEELRLMTQKSEQFQITLQPSTFELFSFVPVTKLKRSIKFAPIGLTNMFNSGGTIEELEYSEVGARLKVKGGGTFLAYSSESPNKCQLNGAELPLEWLPDGKLRLTLAWNEDAGGVSDIAIFY 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere01g3503 861 Gene3D Aldolase class I 220 638 IPR013785 -
Dere01g3503 861 Pfam Raffinose synthase or seed imbibition protein Sip1 26 841 IPR008811 -
Dere01g3503 861 PANTHER - 25 849 IPR008811 -
Dere01g3503 861 SUPERFAMILY (Trans)glycosidases 220 636 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere01g3503 Dere-ChrDere01 49469912 49472815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere01g3503 1 861 Glycoside Hydrolase AT4G01970 58.238 0.0 1061
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g3503 01 49469912 49472815 Dere01g3503 01 49469912 49472815 ECH